RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 CDKN2AIPNLQ96HQ2 116 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 NLNQ9BYT8 704 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 TRIM55Q9BYV6 548 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 PITPNM3Q9BZ71 974 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 ING2Q9H160 280 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 ACTR10Q9NZ32 417 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 ANKMY1Q9P2S6 941 aa17.91■□□□□ 0.46
CTSB-233ENST00000534636 PCDHGA9Q9Y5G4 932 aaKnown RBP17.91■□□□□ 0.46
CTSB-233ENST00000534636 SPTAN1Q13813 2472 aaKnown RBP17.91■□□□□ 0.46
CTSB-233ENST00000534636 SPTBN1Q01082 2364 aaKnown RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 BTN3A3O00478 584 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 KDM1AO60341 852 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 METTL18O95568 372 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 HBQ1P09105 142 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 ST6GAL1P15907 406 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 MSNP26038 577 aaKnown RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 PDHA2P29803 388 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 MLLT10P55197 1068 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 CHAF1BQ13112 559 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 BOP1Q14137 746 aaKnown RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 ITIH4Q14624 930 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 DBN1Q16643 649 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PLEKHS1Q5SXH7 462 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PRAMEF17Q5VTA0 474 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 DNAAF3Q8N9W5 541 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 SLC38A9Q8NBW4 561 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PHC3Q8NDX5 983 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 OR1L3Q8NH93 324 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 ELMO1Q92556 727 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 TTC1Q99614 292 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 BAG1Q99933 345 aaPredicted RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 DPH2Q9BQC3 489 aaPredicted RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 TMEM121Q9BTD3 319 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PIH1D1Q9NWS0 290 aaKnown RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 TCFL5Q9UL49 500 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PACSIN2Q9UNF0 486 aaPredicted RBP17.9■□□□□ 0.46
CTSB-233ENST00000534636 ASF1AQ9Y294 204 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 PADI2Q9Y2J8 665 aa17.9■□□□□ 0.46
CTSB-233ENST00000534636 CCDC78A2IDD5 438 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 TTLL8A6PVC2 850 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 FTCDO95954 541 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PRSS56P0CW18 603 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 AGXTP21549 392 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 SHMT2P34897 504 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 RORAP35398 523 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PTGIRP43119 386 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 CCL11P51671 97 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 GDF10P55107 478 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PLOD1Q02809 727 aaPredicted RBP17.89■□□□□ 0.45
CTSB-233ENST00000534636 LAMB3Q13751 1172 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 ZNF658BQ4V348 819 aaPredicted RBP17.89■□□□□ 0.45
CTSB-233ENST00000534636 SPESP1Q6UW49 350 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PACS1Q6VY07 963 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PIANPQ8IYJ0 282 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 FAM26EQ8N5C1 309 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 TAB3Q8N5C8 712 aaPredicted RBP17.89■□□□□ 0.45
CTSB-233ENST00000534636 TRAPPC9Q96Q05 1148 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 C17orf62Q9BQA9 187 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 KLHL25Q9H0H3 589 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 XKR8Q9H6D3 395 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 PCMTD2Q9NV79 361 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 POLG2Q9UHN1 485 aa17.89■□□□□ 0.45
CTSB-233ENST00000534636 USP9XQ93008 2570 aaPredicted RBP17.89■□□□□ 0.45
CTSB-233ENST00000534636 USP9YO00507 2555 aaPredicted RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 ERI2A8K979 691 aaKnown RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 VPS4BO75351 444 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 SNRNP200O75643 2136 aaKnown RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 TMEM63AO94886 807 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 OR56A5P0C7T3 313 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 PVRP15151 417 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 CD97P48960 835 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 RRADP55042 308 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 CDH17Q12864 832 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 KLF1Q13351 362 aaPredicted RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 LYPLAL1Q5VWZ2 237 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 PPP1R21Q6ZMI0 780 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 ADGRF3Q8IZF5 1079 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 C19orf47Q8N9M1 422 aaKnown RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 VPS4AQ9UN37 437 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 TDRKHQ9Y2W6 561 aaKnown RBP17.88■□□□□ 0.45
CTSB-233ENST00000534636 ZNF451Q9Y4E5 1061 aa17.88■□□□□ 0.45
CTSB-233ENST00000534636 HEATR9A2RTY3 570 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 MROH6A6NGR9 719 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 E7EVH7 732 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 ZNF749O43361 778 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 PDGFAP04085 211 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 BRD3Q15059 726 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 NCF4Q15080 339 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 CCDC38Q502W7 563 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 ZNF789Q5FWF6 425 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 SEL1L2Q5TEA6 688 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 AFTPHQ6ULP2 937 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 FAM198BQ6UWH4 519 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 CDHR3Q6ZTQ4 885 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 RAB43Q86YS6 212 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 TBC1D21Q8IYX1 336 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 OR5AR1Q8NGP9 310 aa17.87■□□□□ 0.45
CTSB-233ENST00000534636 SLC35B2Q8TB61 432 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms