RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CMPK2Q5EBM0 449 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SAMD4BQ5PRF9 694 aaKnown RBP13.1□□□□□ -0.31
BEST1-208ENST00000534553 ICE2Q659A1 982 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 RAET1GQ6H3X3 334 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 PRR23BQ6ZRT6 265 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 Q6ZSR9 355 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 FBXO15Q8NCQ5 510 aaPredicted RBP13.1□□□□□ -0.31
BEST1-208ENST00000534553 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 CCDC138Q96M89 665 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 CDK15Q96Q40 435 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 MYADMQ96S97 322 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 ACOX2Q99424 681 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 TRIM39Q9HCM9 518 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 ASIC5Q9NY37 505 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 ITM2BQ9Y287 266 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
BEST1-208ENST00000534553 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 NR5A2O00482 541 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 FBP2O00757 339 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 CFLARO15519 480 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 LINC01565O15544 149 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 STAMBPO95630 424 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 ANPEPP15144 967 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 P2RY2P41231 377 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 THOP1P52888 689 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 TRAP1Q12931 704 aaKnown RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 FLOT2Q14254 428 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 C18orf21Q32NC0 220 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 C8orf82Q6P1X6 216 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 TMEM220Q6QAJ8 160 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 KBTBD6Q86V97 674 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 KLHDC8AQ8IYD2 350 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 OR9I1Q8NGQ6 314 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 SLC26A7Q8TE54 656 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 USP7Q93009 1102 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 NECTIN4Q96NY8 510 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 DNAJC11Q9NVH1 559 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 EIF3LQ9Y262 564 aaKnown RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 FADS3Q9Y5Q0 445 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 FAM234BA2RU67 622 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 SOD1P00441 154 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 C5AR1P21730 350 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 PRKG2Q13237 762 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 CCNIQ14094 377 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 AGERQ15109 404 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 GLB1L3Q8NCI6 653 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 OR2T11Q8NH01 316 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 SPDL1Q96EA4 605 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 ADA2Q9NZK5 511 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 TMEM181Q9P2C4 612 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 MBD1Q9UIS9 605 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 CNOT6Q9ULM6 557 aaKnown RBP13.09□□□□□ -0.31
BEST1-208ENST00000534553 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 STON1Q9Y6Q2 735 aa13.09□□□□□ -0.31
BEST1-208ENST00000534553 DENND4AQ7Z401 1863 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 C15orf38-AP3S2A0A0A6YYH1 394 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 NPIPB8E9PQR5 432 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 ARNTLO00327 626 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 EEDO75530 441 aaKnown RBP13.08□□□□□ -0.32
BEST1-208ENST00000534553 BCAS2O75934 225 aaPredicted RBP13.08□□□□□ -0.32
BEST1-208ENST00000534553 ACPPP15309 386 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 JAK1P23458 1154 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 TEAD1P28347 426 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 GDF5P43026 501 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 GNPDA1P46926 289 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 CTSCP53634 463 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 DIO3P55073 304 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 PCDH1Q08174 1060 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 CEACAM7Q14002 265 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 ABRAXAS2Q15018 415 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 IMPG1Q17R60 797 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
BEST1-208ENST00000534553 ARPINQ7Z6K5 226 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms