RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 APOEP02649 317 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 VDRP11473 427 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CCNB1P14635 433 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 BPIP17213 487 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TYRP1P17643 537 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TRIM21P19474 475 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ITGA3P26006 1051 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 HTR1BP28222 390 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 APOBEC3AP31941 199 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CXCR5P32302 372 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 GPD2P43304 727 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SERPINH1P50454 418 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ART1P52961 327 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CDH4P55283 916 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 KCNK10P57789 538 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 FOXL2P58012 376 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 AMPD3Q01432 767 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 LTBQ06643 244 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ADCY2Q08462 1091 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 FAPQ12884 760 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 BIRC2Q13490 618 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TRA2AQ13595 282 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 KCNAB1Q14722 419 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NR1D2Q14995 579 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 LLGL1Q15334 1064 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 UGT8Q16880 541 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF630Q2M218 657 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 C5orf22Q49AR2 442 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM52BQ4KMG9 183 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CBWD6Q4V339 395 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RAB6CQ53S08 254 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CBWD3Q5JTY5 395 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CBWD5Q5RIA9 395 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PRAMEF17Q5VTA0 474 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM198Q66K66 360 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 FBXO42Q6P3S6 717 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DOK6Q6PKX4 331 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM270Q6UE05 265 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 GDPD4Q6W3E5 623 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 Q6YL49 198 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC73Q6ZRK6 1079 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RFLNAQ6ZTI6 216 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 CENPQQ7L2Z9 268 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 GDF7Q7Z4P5 450 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 KCNMB4Q86W47 210 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RASGRP3Q8IV61 690 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RHOT1Q8IXI2 618 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DRC7Q8IY82 874 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SCML4Q8N228 414 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 WDTC1Q8N5D0 677 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 UBR7Q8N806 425 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ATP6V0D2Q8N8Y2 350 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA0895Q8NCT3 520 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DENND6BQ8NEG7 585 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 OR2W6PQ8NHA6 318 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ATL2Q8NHH9 583 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NTN5Q8WTR8 489 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 HMCESQ96FZ2 354 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 AHCYL2Q96HN2 611 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 HIST1H2AHQ96KK5 128 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NSMCE3Q96MG7 304 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NAP1L5Q96NT1 182 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TEFMQ96QE5 360 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 OR6C1Q96RD1 312 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DCLRE1CQ96SD1 692 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 BARD1Q99728 777 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 HIST1H2AJQ99878 128 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 C7orf25Q9BPX7 421 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM121Q9BTD3 319 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 NDC1Q9BTX1 674 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RAB6CQ9H0N0 254 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 KCTD10Q9H3F6 313 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SERHL2Q9H4I8 314 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM204AQ9H8W3 233 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SYNPO2LQ9H987 977 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 LHX9Q9NQ69 397 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DDIT4Q9NX09 232 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 RAB20Q9NX57 234 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SIDT1Q9NXL6 827 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNF212Q9UDV6 495 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC12A6Q9UHW9 1150 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PADI1Q9ULC6 663 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SUFUQ9UMX1 484 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 FARSAQ9Y285 508 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PCDHGA9Q9Y5G4 932 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PCYT1BQ9Y5K3 369 aaPredicted RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 SRPRBQ9Y5M8 271 aaKnown RBP2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 COX11Q9Y6N1 276 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 DGKBQ9Y6T7 804 aa2.93□□□□□ -1.94
CHMP4A-208ENST00000534106 PRSS38A1L453 326 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 E5RJQ4 531 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CACNB4O00305 520 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 E2F3O00716 465 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ZNHIT1O43257 154 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 KLRC4O43908 158 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 NCR1O76036 304 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 LCA5LO95447 670 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 POP4O95707 220 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms