RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TTI1O43156 1089 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 AVILO75366 819 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 KATNA1O75449 491 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 CREG1O75629 220 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 POP7O75817 140 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 RASSF9O75901 435 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 KIAA0754O94854 1291 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TMEM63AO94886 807 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 GOT2P00505 430 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 VIPP01282 170 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 CCNYL3P0C7X3 344 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 GPR89BP0CG08 455 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 FGF5P12034 268 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 AMD1P17707 334 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 SLC19A1P41440 591 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 LEPRP48357 1165 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 SEPHS1P49903 392 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 CTSCP53634 463 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 PMS2P54278 862 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 MRPS25P82663 173 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 PTK6Q13882 451 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 GPR33Q49SQ1 333 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
COPB1-210ENST00000533533 FASTKD1Q53R41 847 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 AFTPHQ6ULP2 937 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 NLRP9Q7RTR0 991 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TMEM135Q86UB9 458 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 AMZ2Q86W34 360 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 RASGRP3Q8IV61 690 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TRIM48Q8IWZ4 208 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 PPIL6Q8IXY8 311 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 NXPE1Q8N323 547 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 BEND7Q8N7W2 519 aaPredicted RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 OR4L1Q8NH43 312 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 DTX3LQ8TDB6 740 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 ELMO2Q96JJ3 720 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 ZNF778Q96MU6 729 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TGM7Q96PF1 710 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TTC1Q99614 292 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TRIM51Q9BSJ1 452 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 TWSG1Q9GZX9 223 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 ZNF768Q9H5H4 540 aaKnown RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 SMOXQ9NWM0 555 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 ZDHHC3Q9NYG2 299 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 ZNF624Q9P2J8 865 aaPredicted RBP8.5□□□□□ -1.05
COPB1-210ENST00000533533 SLC23A2Q9UGH3 650 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 PCYOX1Q9UHG3 505 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 LNPEPQ9UIQ6 1025 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 PADI1Q9ULC6 663 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 PCDHGA6Q9Y5G7 932 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 MAD1L1Q9Y6D9 718 aa8.5□□□□□ -1.05
COPB1-210ENST00000533533 CCDC88CQ9P219 2028 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 SDR42E2A6NKP2 422 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 TTLL8A6PVC2 850 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 EFCAB8A8MWE9 144 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 C21orf140B9A014 251 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 H7C0S8 307 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 DNALI1O14645 258 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 CHUKO15111 745 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 KIF1CO43896 1103 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 VPS4BO75351 444 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 SPAG6O75602 509 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 MT-ND3P03897 115 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PDGFAP04085 211 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ATP1B2P14415 290 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 IDSP22304 550 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ACRV1P26436 265 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 NMBRP28336 390 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PPARGP37231 505 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 PTGIRP43119 386 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 CAPZBP47756 277 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 UQCRFS1P47985 274 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 DRG2P55039 364 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 CKAP4Q07065 602 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 DNASE1L3Q13609 305 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 DHX34Q14147 1143 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 DBN1Q16643 649 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 CACHD1Q5VU97 1274 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 HIST2H2BCQ6DN03 193 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 CAPRIN2Q6IMN6 1127 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 ABRAXAS1Q6UWZ7 409 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 ZNF534Q76KX8 674 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PRSS42Q7Z5A4 293 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PCGF5Q86SE9 256 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PPP1R3BQ86XI6 285 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ZNF547Q8IVP9 402 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 MPP5Q8N3R9 675 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 GALNT11Q8NCW6 608 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 SPATA4Q8NEY3 305 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 OR13J1Q8NGT2 312 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 HEXDCQ8WVB3 486 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 KLHL6Q8WZ60 621 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 RSC1A1Q92681 617 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ZDHHC12Q96GR4 267 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ZNF514Q96K75 400 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 SERPINB12Q96P63 405 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 TIMM29Q9BSF4 260 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms