RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CEP128Q6ZU80 1094 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 STRA8Q7Z7C7 330 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 ZC3HC1Q86WB0 502 aaKnown RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 OR5K2Q8NHB8 316 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 CFAP61Q8NHU2 1237 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 FBF1Q8TES7 1133 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 LIN37Q96GY3 246 aaPredicted RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TRIT1Q9H3H1 467 aaKnown RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 TFB2MQ9H5Q4 396 aaKnown RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 EPHA6Q9UF33 1036 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 RUVBL2Q9Y230 463 aaKnown RBP11.66□□□□□ -0.54
SSBP3-214ENST00000533209 NFS1Q9Y697 457 aa11.66□□□□□ -0.54
SSBP3-214ENST00000533209 PMS2P1A4D2B8 440 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 OR6C74A6NCV1 312 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 OR5K3A6NET4 321 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TMX2-CTNND1H3BSU7 103 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 VPS26AO75436 327 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 MATN4O95460 622 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 FDXRP22570 491 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 STX2P32856 288 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
SSBP3-214ENST00000533209 PPP1CAP62136 330 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TRA2AQ13595 282 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSBP3-214ENST00000533209 GRB7Q14451 532 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 C16orf72Q14CZ0 275 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 KLHL38Q2WGJ6 581 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TTLL9Q3SXZ7 439 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 KBTBD12Q3ZCT8 623 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 PHF19Q5T6S3 580 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 HECTD2Q5U5R9 776 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 KLHL35Q6PF15 583 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 PLXDC1Q8IUK5 500 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 GPATCH11Q8N954 259 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 OR4E2Q8NGC2 313 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 LCN9Q8WX39 176 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 CDKL2Q92772 493 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 OLFM1Q99784 485 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 STRADBQ9C0K7 418 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 NRSN2Q9GZP1 204 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 RAB33BQ9H082 229 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 SRMSQ9H3Y6 488 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 RHOJQ9H4E5 214 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 XKR8Q9H6D3 395 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 POLG2Q9UHN1 485 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TSR3Q9UJK0 312 aaKnown RBP11.65□□□□□ -0.54
SSBP3-214ENST00000533209 ICKQ9UPZ9 632 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 TDRKHQ9Y2W6 561 aaKnown RBP11.65□□□□□ -0.54
SSBP3-214ENST00000533209 VWA7Q9Y334 891 aa11.65□□□□□ -0.54
SSBP3-214ENST00000533209 CCDC187A0A096LP49 1063 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 BTN3A3O00478 584 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CAPN5O15484 640 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 KIF1CO43896 1103 aaKnown RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 C1orf105O95561 183 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 RPN2P04844 631 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 MPOP05164 745 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CBSLP0DN79 551 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 POLR2CP19387 275 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 MCM3P25205 808 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CBSP35520 551 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 PGGT1BP53609 377 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 RTP5Q14D33 572 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 EFTUD2Q15029 972 aaKnown RBP eCLIP11.64□□□□□ -0.554e-7■■■■□ 23.6
SSBP3-214ENST00000533209 SNAP47Q5SQN1 464 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 FAM45BPQ6NSW5 357 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 UGT3A1Q6NUS8 523 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 IRGCQ6NXR0 463 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 PAQR3Q6TCH7 311 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CYHR1Q6ZMK1 362 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 NEK10Q6ZWH5 1172 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 RAB11FIP2Q7L804 512 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 OOSP2Q86WS3 158 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 RASGRP3Q8IV61 690 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 DCUN1D3Q8IWE4 304 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CPNE9Q8IYJ1 553 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 ADGRF3Q8IZF5 1079 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 RCBTB1Q8NDN9 531 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 WDR36Q8NI36 951 aaKnown RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 FAM45AQ8TCE6 357 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 SKA2Q8WVK7 121 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 PRR11Q96HE9 360 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 TGM7Q96PF1 710 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CPNE1Q99829 537 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 FUT8Q9BYC5 575 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 TWSG1Q9GZX9 223 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 CDC42EP4Q9H3Q1 356 aaKnown RBP11.64□□□□□ -0.55
SSBP3-214ENST00000533209 POLR1BQ9H9Y6 1135 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 HRASLS2Q9NWW9 162 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 PLAGL1Q9UM63 463 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 SATB2Q9UPW6 733 aa11.64□□□□□ -0.55
SSBP3-214ENST00000533209 FREM2Q5SZK8 3169 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms