RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 MANEAQ5SRI9 462 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 ARHGAP40Q5TG30 622 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 IZUMO3Q5VZ72 239 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 NEPROQ6NW34 567 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 CCDC81Q6ZN84 652 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-210ENST00000532935 HOOK3Q86VS8 718 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 AMIGO1Q86WK6 493 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 CILP2Q8IUL8 1156 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 VRK3Q8IV63 474 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 CARFQ8N187 725 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 OR5K2Q8NHB8 316 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 LPGAT1Q92604 370 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 SLC41A2Q96JW4 573 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 OR6C1Q96RD1 312 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 NRTNQ99748 197 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 POLG2Q9UHN1 485 aa14.93□□□□□ -0.02
CPSF1-210ENST00000532935 ZCWPW2A0A1B0GU75 182 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 GSAPA4D1B5 854 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 K7ENP7 123 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 BTN3A3O00478 584 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 BTN3A1O00481 513 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 EFSO43281 561 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 USP1O94782 785 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 SLCO2B1O94956 709 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 FMO4P31512 558 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 ATP1A2P50993 1020 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 IL11RAQ14626 422 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 DNAJC21Q5F1R6 531 aaKnown RBP14.92□□□□□ -0.02
CPSF1-210ENST00000532935 CTSL3PQ5NE16 218 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 INO80CQ6PI98 192 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-210ENST00000532935 CENPUQ71F23 418 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 VASH2Q86V25 355 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 KMT5CQ86Y97 462 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 SIDT2Q8NBJ9 832 aaKnown RBP14.92□□□□□ -0.02
CPSF1-210ENST00000532935 SNRNP27Q8WVK2 155 aaKnown RBP14.92□□□□□ -0.02
CPSF1-210ENST00000532935 NKD1Q969G9 470 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 STAMBPL1Q96FJ0 436 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 PPM1MQ96MI6 270 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 BIRC8Q96P09 236 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 SPRY4Q9C004 299 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 XKR8Q9H6D3 395 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 PILRAQ9UKJ1 303 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 POMT2Q9UKY4 750 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 ICKQ9UPZ9 632 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 TDRKHQ9Y2W6 561 aaKnown RBP14.92□□□□□ -0.02
CPSF1-210ENST00000532935 SPTBP11277 2137 aa14.92□□□□□ -0.02
CPSF1-210ENST00000532935 TEX51A0A1B0GUA7 166 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 KPNA5O15131 536 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 RAD1O60671 282 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 STK17BO94768 372 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ZBTB11O95625 1053 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ESR1P03372 595 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 FGF5P12034 268 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 FOLR1P15328 257 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 CASQ1P31415 396 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 SHMT2P34897 504 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ARL4DP49703 201 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ADARP55265 1226 aaKnown RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 HSD11B2P80365 405 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 THOC5Q13769 683 aaKnown RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 MORF4L2Q15014 288 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 LONRF1Q17RB8 773 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ZNF470Q6ECI4 717 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 CYB5D1Q6P9G0 228 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 FBXO38Q6PIJ6 1188 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 OTOAQ7RTW8 1153 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ADGRF3Q8IZF5 1079 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 CACNA2D3Q8IZS8 1091 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 D2HGDHQ8N465 521 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 ELMO2Q96JJ3 720 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 TRIM51Q9BSJ1 452 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 C1GALT1Q9NS00 363 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 C20orf96Q9NUD7 363 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 INTS10Q9NVR2 710 aaKnown RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 VPS9D1Q9Y2B5 631 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 CRYL1Q9Y2S2 319 aa14.91□□□□□ -0.02
CPSF1-210ENST00000532935 TMEM184BQ9Y519 407 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-210ENST00000532935 PCM1Q15154 2024 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 C2orf74A8MZ97 194 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 H3BMM5 538 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 TTI1O43156 1089 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 NIPSNAP2O75323 286 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 S1PR4O95977 384 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 RPN2P04844 631 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 EBLN1P0CF75 366 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 TPBGLP0DKB5 382 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 PGAM1P18669 254 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 CDH3P22223 829 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 PRDX3P30048 256 aaKnown RBP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 ETF1P62495 437 aaKnown RBP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 ACY1Q03154 408 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
CPSF1-210ENST00000532935 ABRQ12979 859 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 TUBB3Q13509 450 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 ZNF789Q5FWF6 425 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 PLEKHS1Q5SXH7 462 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
CPSF1-210ENST00000532935 UNC5AQ6ZN44 842 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms