RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 WASH2PQ6VEQ5 465 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 SLCO6A1Q86UG4 719 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 GKN2Q86XP6 184 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 MARCH9Q86YJ5 346 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 SLC22A15Q8IZD6 547 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 CENPLQ8N0S6 344 aaPredicted RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 PLD6Q8N2A8 252 aaKnown RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 ARL10Q8N8L6 244 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 FAM181AQ8N9Y4 354 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 FAM45AQ8TCE6 357 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 RHBDD1Q8TEB9 315 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 EEF1AKMT1Q8WVE0 214 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 ISL2Q96A47 359 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 LINGO1Q96FE5 620 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 CNDP2Q96KP4 475 aaKnown RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 PPM1MQ96MI6 270 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 RUFY1Q96T51 708 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 HGH1Q9BTY7 390 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 MENTQ9BUN1 341 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 TSSK1BQ9BXA7 367 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 ROPN1BQ9BZX4 212 aaPredicted RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 CCDC68Q9H2F9 335 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 XKR8Q9H6D3 395 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 ROPN1Q9HAT0 212 aaPredicted RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 WASH6PQ9NQA3 447 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 SNX15Q9NRS6 342 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 OGFRQ9NZT2 677 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 CPNE7Q9UBL6 633 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 SLC24A2Q9UI40 661 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 VWA7Q9Y334 891 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 COMMD10Q9Y6G5 202 aa7.79□□□□□ -1.16
TRIM49-202ENST00000532501 DNMT3AQ9Y6K1 912 aaPredicted RBP7.79□□□□□ -1.16
TRIM49-202ENST00000532501 A0A1W2PPM1 405 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 A0A1W2PQM1 296 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CPED1A4D0V7 1026 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 NPEPPSL1A6NEC2 478 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 E5RI56 91 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CDC7O00311 574 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 LIN7AO14910 233 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 RFPL1O75677 317 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 KRT38O76015 456 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SLC35G4P0C7Q5 338 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CREB1P16220 341 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 IDSP22304 550 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SPRP35270 261 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 KCNC1P48547 511 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SERPINB9P50453 376 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 YBX1P67809 324 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZNF844Q08AG5 666 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 GPR18Q14330 331 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 USP10Q14694 798 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 RASA2Q15283 850 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 TMED2Q15363 201 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PHKG1Q16816 387 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 RSPO4Q2I0M5 234 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SYTL3Q4VX76 610 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PLEKHS1Q5SXH7 462 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 NKAIN2Q5VXU1 208 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZCCHC8Q6NZY4 707 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 LVRNQ6Q4G3 990 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SH2D5Q6ZV89 423 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 OTOAQ7RTW8 1153 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 EFL1Q7Z2Z2 1120 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 HDXQ7Z353 690 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 IQCKQ8N0W5 287 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 SDR16C5Q8N3Y7 309 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 RIBC1Q8N443 379 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CFAP61Q8NHU2 1237 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 NETO1Q8TDF5 533 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 KCTD4Q8WVF5 259 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 RSC1A1Q92681 617 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 TFGQ92734 400 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PTERQ96BW5 349 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZIM3Q96PE6 472 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PANX3Q96QZ0 392 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 C12orf65Q9H3J6 166 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ACBD3Q9H3P7 528 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 IGSF5Q9NSI5 407 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 TMEM9Q9P0T7 183 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 TBK1Q9UHD2 729 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 TRMT6Q9UJA5 497 aaKnown RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PADI4Q9UM07 663 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 DOLKQ9UPQ8 538 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PLAAQ9Y263 795 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CACNA1AO00555 2505 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CEP295Q9C0D2 2601 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 IQANK1A0A1B0GTG1 560 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 PMS2P1A4D2B8 440 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 EME2A4GXA9 379 aaPredicted RBP7.78□□□□□ -1.16
TRIM49-202ENST00000532501 KLHL33A6NCF5 533 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 GOLGA8RI6L899 631 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 ZBTB14O43829 449 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 CDH16O75309 829 aa7.78□□□□□ -1.16
TRIM49-202ENST00000532501 VPS26AO75436 327 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms