RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TYSND1Q2T9J0 566 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 DNAJC21Q5F1R6 531 aaKnown RBP22.31■■□□□ 1.16
CAPN1-222ENST00000532285 RNASEH2BQ5TBB1 312 aaKnown RBP22.31■■□□□ 1.16
CAPN1-222ENST00000532285 PCGF5Q86SE9 256 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 TMEM135Q86UB9 458 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 NLGN4XQ8N0W4 816 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 KRT222Q8N1A0 295 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 ZSCAN1Q8NBB4 408 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 NLGN4YQ8NFZ3 816 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-222ENST00000532285 LKAAEAR1Q8TD35 194 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 RUNDC3BQ96NL0 473 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 PDE7BQ9NP56 450 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 C1GALT1Q9NS00 363 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 CDYLQ9Y232 598 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 RPS6KL1Q9Y6S9 549 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 ATMQ13315 3056 aa22.31■■□□□ 1.16
CAPN1-222ENST00000532285 BTN3A3O00478 584 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 BTN3A1O00481 513 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 DNALI1O14645 258 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 KDM1AO60341 852 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 SLCO2B1O94956 709 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 PAFAH1B1P43034 410 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 PTGIRP43119 386 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 EIF3BP55884 814 aaKnown RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 ACY1Q03154 408 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 SOWAHCQ53LP3 525 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 NEPROQ6NW34 567 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 SYDE1Q6ZW31 735 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 BPHLQ86WA6 291 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 PPP1R3BQ86XI6 285 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 RASGRP3Q8IV61 690 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 D2HGDHQ8N465 521 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 ZNF669Q96BR6 464 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-222ENST00000532285 SIGLEC10Q96LC7 697 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 ULBP3Q9BZM4 244 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 XKR8Q9H6D3 395 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 RNF14Q9UBS8 474 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 VPS9D1Q9Y2B5 631 aa22.3■■□□□ 1.16
CAPN1-222ENST00000532285 C2orf74A8MZ97 194 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 DLGAP3O95886 979 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 FOLR1P15328 257 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 CDH3P22223 829 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 PRDX3P30048 256 aaKnown RBP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 SHMT2P34897 504 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 ADARP55265 1226 aaKnown RBP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 TUBB3Q13509 450 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 MAP7Q14244 749 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 KCNAB1Q14722 419 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 TMTC4Q5T4D3 741 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 TIPARPQ7Z3E1 657 aaKnown RBP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 HOOK3Q86VS8 718 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 CILP2Q8IUL8 1156 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 VRK3Q8IV63 474 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 ADGRF3Q8IZF5 1079 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 LPGAT1Q92604 370 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 ELMO2Q96JJ3 720 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 BIRC8Q96P09 236 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 FCRL4Q96PJ5 515 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 NRTNQ99748 197 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 TRIM56Q9BRZ2 755 aaKnown RBP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 KCND1Q9NSA2 647 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 RARRES3Q9UL19 164 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 ICKQ9UPZ9 632 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 TDRKHQ9Y2W6 561 aaKnown RBP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 MAD1L1Q9Y6D9 718 aa22.29■■□□□ 1.16
CAPN1-222ENST00000532285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
CAPN1-222ENST00000532285 ZCWPW2A0A1B0GU75 182 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 H3BMM5 538 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 CCDC188H7C350 402 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 ERVH48-1M5A8F1 160 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 SPAG6O75602 509 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 USP1O94782 785 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 ESR1P03372 595 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 RPN2P04844 631 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 EBLN1P0CF75 366 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 FMO4P31512 558 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 ABHD18Q0P651 414 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 THOC5Q13769 683 aaKnown RBP22.28■■□□□ 1.16
CAPN1-222ENST00000532285 CTSL3PQ5NE16 218 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 UNC5DQ6UXZ4 953 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 OTOAQ7RTW8 1153 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 KLHL7Q8IXQ5 586 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 LSM14AQ8ND56 463 aaKnown RBP22.28■■□□□ 1.16
CAPN1-222ENST00000532285 GSDMBQ8TAX9 411 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 FGF21Q9NSA1 209 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 INTS10Q9NVR2 710 aaKnown RBP22.28■■□□□ 1.16
CAPN1-222ENST00000532285 OR6C2Q9NZP2 312 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 BTRCQ9Y297 605 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 PCDHGA4Q9Y5G9 962 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 CACNA1GO43497 2377 aa22.28■■□□□ 1.16
CAPN1-222ENST00000532285 ATXN7O15265 892 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-222ENST00000532285 TUBB4BP68371 445 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 DR1Q01658 176 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 ABRQ12979 859 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 TUBB2AQ13885 445 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 LONRF1Q17RB8 773 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 PLEKHS1Q5SXH7 462 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 IZUMO3Q5VZ72 239 aa22.27■■□□□ 1.16
CAPN1-222ENST00000532285 C6orf15Q6UXA7 325 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms