RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CATSPER3Q86XQ3 398 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 LURAP1LQ8IV03 231 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 CPOQ8IVL8 374 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 LNX1Q8TBB1 728 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-213ENST00000530784 TXNDC15Q96J42 360 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 FZD8Q9H461 694 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 CDH7Q9ULB5 785 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 R4GN57 208 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 ZDBF2Q9HCK1 2354 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-213ENST00000530784 DYTNA2CJ06 578 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 EBAG9O00559 213 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 TIMM23O14925 209 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 CCL16O15467 120 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 JAK2O60674 1132 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 MED24O75448 989 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 OR52Z1P0C646 297 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 CYP11B2P19099 503 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 NAMPTP43490 491 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 CXCR3P49682 368 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 NTHL1P78549 312 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 TAF12Q16514 161 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 IZUMO4Q1ZYL8 232 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 DCAF4L1Q3SXM0 396 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 HAUS3Q68CZ6 603 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 TYW3Q6IPR3 259 aaKnown RBP6.95□□□□□ -1.3
CSDE1-213ENST00000530784 BBS12Q6ZW61 710 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-213ENST00000530784 RFWD2Q8NHY2 731 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 FGF13Q92913 245 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 FGF14Q92915 247 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 FIZ1Q96SL8 496 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 POLR3CQ9BUI4 534 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-213ENST00000530784 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 ANKRD10Q9NXR5 420 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 DLGAP2Q9P1A6 1054 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 PCDHGB5Q9Y5G0 923 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 PCDHGB1Q9Y5G3 927 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 C2orf16Q68DN1 1984 aa6.95□□□□□ -1.3
CSDE1-213ENST00000530784 ARHGAP10A1A4S6 786 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 PABPN1LA6NDY0 278 aaKnown RBP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 TMEM189-UBE2V1I3L0A0 370 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 J3KR12 359 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 EIF3FO00303 357 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ADAM12O43184 909 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 TRAPPC3O43617 180 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 B3GAT3O94766 335 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 EDN1P05305 212 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 SP9P0CG40 484 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 TFPIP10646 304 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 MYF6P23409 242 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 RPA1P27694 616 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 OR1D2P34982 312 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 CCR5P51681 352 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 EFNA5P52803 228 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 STARD6P59095 220 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ST3GAL1Q11201 340 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 GRSF1Q12849 480 aaKnown RBP eCLIP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ORC2Q13416 577 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 NAB2Q15742 525 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 MLF2Q15773 248 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 DCAF6Q58WW2 860 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 GLRA4Q5JXX5 417 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ATF7IP2Q5U623 682 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ATG16L1Q676U5 607 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 C16orf82Q7Z2V1 217 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ADGRG6Q86SQ4 1221 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ITFG1Q8TB96 612 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 KIFAP3Q92845 792 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 IFT74Q96LB3 600 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 KXD1Q9BQD3 176 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 RPP25Q9BUL9 199 aaKnown RBP6.94□□□□□ -1.3
CSDE1-213ENST00000530784 KIFC3Q9BVG8 833 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 CXCL16Q9H2A7 254 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 NDRG3Q9UGV2 375 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 PHLPP2Q6ZVD8 1323 aa6.94□□□□□ -1.3
CSDE1-213ENST00000530784 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 KANSL1LA0AUZ9 987 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 TYW5A2RUC4 315 aaKnown RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 CBY3A6NI87 242 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 KINO60870 393 aaKnown RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 ATP2C2O75185 946 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 SRD5A1P18405 259 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 MUTP22033 750 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 RYKP34925 604 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 CCT6AP40227 531 aaKnown RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 BLKP51451 505 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 C9orf57Q5W0N0 161 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 KIAA2013Q8IYS2 634 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 ING5Q8WYH8 240 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 RTP4Q96DX8 246 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 CCDC94Q9BW85 323 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 SLC38A7Q9NVC3 462 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 HCFC1R1Q9NWW0 138 aa6.93□□□□□ -1.3
CSDE1-213ENST00000530784 NOL7Q9UMY1 257 aaKnown RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 TDRD15B5MCY1 1934 aaKnown RBP6.93□□□□□ -1.3
CSDE1-213ENST00000530784 CFAP54Q96N23 3096 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms