RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 NRP2O60462 931 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 RFPL2O75678 378 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 FGF4P08620 206 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 TCEA1P23193 301 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 PSMA3P25788 255 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 CHRNA6Q15825 494 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 KCTD8Q6ZWB6 473 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 FUNDC1Q8IVP5 155 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 HBEGFQ99075 208 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 TCF25Q9BQ70 676 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 ADI1Q9BV57 179 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 P2RY12Q9H244 342 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 ATP13A3Q9H7F0 1226 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 RMND5AQ9H871 391 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 NOL11Q9H8H0 719 aaKnown RBP11.35□□□□□ -0.59
USP35-207ENST00000530546 PSME2Q9UL46 239 aa11.35□□□□□ -0.59
USP35-207ENST00000530546 OR4F21O95013 312 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 CYBBP04839 570 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 RPS17P08708 135 aaKnown RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 ZNF7P17097 686 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 BPIP17213 487 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 CLCN4P51793 760 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 CLCN7P51798 805 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ERVFC1P60507 584 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SLC7A9P82251 487 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 DMPKQ09013 629 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 LRP8Q14114 963 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.594e-14■■■■■ 47.2
USP35-207ENST00000530546 VPS26BQ4G0F5 336 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 C1orf53Q5VUE5 145 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HMBOX1Q6NT76 420 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ABRAXAS1Q6UWZ7 409 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 RFLNAQ6ZTI6 216 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 VASH1Q7L8A9 365 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 FAM217AQ8IXS0 508 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SLCO4A1Q96BD0 722 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SLC25A23Q9BV35 468 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HECAQ9UBI9 543 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 PCTPQ9UKL6 214 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 CNOT6Q9ULM6 557 aaKnown RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 NEDD8-MDP1E9PL57 170 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SOCS2O14508 198 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 KATNA1O75449 491 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ZNF821O75541 412 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 ADH1AP07327 375 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SRCP12931 536 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 LBPP18428 481 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ITGALP20701 1170 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 GPX3P22352 226 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HLA-FP30511 346 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 DIO3P55073 304 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 PRKCQQ04759 706 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 MERTKQ12866 999 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SLC36A3Q495N2 470 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 TIGD2Q4W5G0 525 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 CCDC149Q6ZUS6 474 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 STK40Q8N2I9 435 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 OR2AP1Q8NGE2 309 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 OR52B6Q8NGF0 335 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 FIBINQ8TAL6 211 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 NAA50Q9GZZ1 169 aaKnown RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 ZDHHC6Q9H6R6 413 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SACM1LQ9NTJ5 587 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ARMC1Q9NVT9 282 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 SLCO3A1Q9UIG8 710 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ZNF225Q9UK10 706 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 NPIPB15A6NHN6 443 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 GAPDHSO14556 408 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 GMNNO75496 209 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 MYO1DO94832 1006 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 KRT75O95678 551 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 JUNBP17275 347 aaPredicted RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 RPL10P27635 214 aaKnown RBP11.34□□□□□ -0.59
USP35-207ENST00000530546 SERPINA4P29622 427 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 HPCAL1P37235 193 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 OCA2Q04671 838 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 NFATC2Q13469 925 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 LILRA6Q6PI73 481 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 CYP2R1Q6VVX0 501 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 MIER2Q8N344 545 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 S100ZQ8WXG8 99 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 ASIC4Q96FT7 647 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 RAD21L1Q9H4I0 556 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 MRGBPQ9NV56 204 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 DHRS7Q9Y394 339 aa11.34□□□□□ -0.59
USP35-207ENST00000530546 GNAO1P09471 354 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 RCVRNP35243 200 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 SLC7A2P52569 658 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms