RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 DTD2Q96FN9 168 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 LENG8Q96PV6 779 aaPredicted RBP8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 BTBD2Q9BX70 525 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 SLC17A9Q9BYT1 436 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 TRABDQ9H4I3 376 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 FZD3Q9NPG1 666 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 MBNL1Q9NR56 388 aaKnown RBP8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 CATSPERZQ9NTU4 200 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 PIH1D1Q9NWS0 290 aaKnown RBP8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 HACD3Q9P035 362 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 ASIC3Q9UHC3 531 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 EIF2B4Q9UI10 523 aaKnown RBP8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 SHOC2Q9UQ13 582 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 DMTF1Q9Y222 760 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 CA5BQ9Y2D0 317 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 AKAP13Q12802 2813 aa8.68□□□□□ -1.02
CCDC90B-217ENST00000530253 E7EVH7 732 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 GAPDHSO14556 408 aaPredicted RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SLC31A1O15431 190 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 LDB2O43679 373 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 TM7SF2O76062 418 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SEC31AO94979 1220 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PAK4O96013 591 aaPredicted RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 WNT1P04628 370 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 HNRNPA2B1P22626 353 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PSMA3P25788 255 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 NFKBIAP25963 317 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 HOXD12P35452 270 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 HMGCLP35914 325 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 RPL21P46778 160 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SPINT3P49223 89 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 ZNF140P52738 457 aaPredicted RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PFN3P60673 137 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 BNC1Q01954 994 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CDH17Q12864 832 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 FOXL1Q12952 345 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 ARHGEF7Q14155 803 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 IRF4Q15306 451 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 GON4LQ3T8J9 2241 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 WDR45BQ5MNZ6 344 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CERCAMQ5T4B2 595 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 IZUMO3Q5VZ72 239 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 DUPD1Q68J44 220 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 KYAT3Q6YP21 454 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 ABI3BPQ7Z7G0 1075 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 LINC00523Q86TU6 105 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CAND1Q86VP6 1230 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 ZNF575Q86XF7 245 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SYT12Q8IV01 421 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 ZCCHC9Q8N567 271 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PLA2G15Q8NCC3 412 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 GPR26Q8NDV2 337 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 MCUQ8NE86 351 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 BLOC1S5Q8TDH9 187 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CFHR4Q92496 578 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SNX19Q92543 992 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 NUS1Q96E22 293 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 BMFQ96LC9 184 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PCDH15Q96QU1 1955 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 SRPK1Q96SB4 655 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 MYOCQ99972 504 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CARD6Q9BX69 1037 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 TM9SF3Q9HD45 589 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 GRHL1Q9NZI5 618 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 IL17CQ9P0M4 197 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 PCDHGA5Q9Y5G8 931 aa8.67□□□□□ -1.02
CCDC90B-217ENST00000530253 CNOT1A5YKK6 2376 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 THADAQ6YHU6 1953 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 FRYQ5TBA9 3013 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 PMS2P1A4D2B8 440 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 CTAGE15A4D2H0 777 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 RGSL1A5PLK6 1076 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 POM121BA6NF01 834 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 EFCAB8A8MWE9 144 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 PRAMEF26H0Y7S4 382 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 BUD23O43709 281 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 RETP07949 1114 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 CTAGE8P0CG41 777 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 MLNP12872 115 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 BPIP17213 487 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 TPH1P17752 444 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 TEAD1P28347 426 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 ADCY8P40145 1251 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 MPLP40238 635 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 TERF1P54274 439 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 CLDN2P57739 230 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 DCDC1P59894 354 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 ACVR1Q04771 509 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 MTM1Q13496 603 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 PTPRCAPQ14761 206 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 POU6F1Q14863 301 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 ACOX1Q15067 660 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 TAF1AQ15573 450 aaPredicted RBP8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 TPRG1LQ5T0D9 272 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 HENMT1Q5T8I9 393 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 DENND2CQ68D51 928 aa8.66□□□□□ -1.02
CCDC90B-217ENST00000530253 HIBCHQ6NVY1 386 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms