RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 POLR1EQ9GZS1 481 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 OR2AG1Q9H205 316 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 OSGEPL1Q9H4B0 414 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 FAM83DQ9H4H8 585 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 ACTL8Q9H568 366 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 STN1Q9H668 368 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 RMI1Q9H9A7 625 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 UCK1Q9HA47 277 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 DNPEPQ9ULA0 475 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 VPS4AQ9UN37 437 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 NOVA2Q9UNW9 492 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 DNAJC16Q9Y2G8 782 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 WDR37Q9Y2I8 494 aa8.36□□□□□ -1.07
TGFBR3-208ENST00000529608 CACNA1DQ01668 2161 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 ARGFXA6NJG6 315 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 OR5K4A6NMS3 321 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 ANKRD66B4E2M5 251 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 APOC4-APOC2K7ER74 178 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 RASGRF2O14827 1237 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 MATN3O15232 486 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TP73O15350 636 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TOX3O15405 576 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CST8O60676 142 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 RASSF9O75901 435 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 VIPP01282 170 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 APOC2P02655 101 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PIRTP0C851 137 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 NELFEP18615 380 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 RPL10P27635 214 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CA5AP35218 305 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 GARSP41250 739 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CAPZBP47756 277 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 HNRNPH2P55795 449 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 GALNT2Q10471 571 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC10A2Q12908 348 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 GALNT3Q14435 633 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 IL11RAQ14626 422 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PAFAH1B3Q15102 231 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TRIP13Q15645 432 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 P3H1Q32P28 736 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CACHD1Q5VU97 1274 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TAOK1Q7L7X3 1001 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PRSS42Q7Z5A4 293 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 C11orf96Q7Z7L8 435 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 RFX6Q8HWS3 928 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PHYKPLQ8IUZ5 450 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CNTD1Q8N815 330 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC38A9Q8NBW4 561 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 GPR150Q8NGU9 434 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CDC42EP4Q9H3Q1 356 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC40A1Q9NP59 571 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 KCND3Q9UK17 655 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PRDM4Q9UKN5 801 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 PADI1Q9ULC6 663 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 TTLL3Q9Y4R7 772 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 ITPR2Q14571 2701 aa8.35□□□□□ -1.07
TGFBR3-208ENST00000529608 MYO9AB2RTY4 2548 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 TLDC2A0PJX2 215 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC25A14O95258 325 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 RECKO95980 971 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SHBGP04278 402 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ABHD2P08910 425 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 EBLN1P0CF75 366 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SLC2A4P14672 509 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ZFXP17010 805 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ZNF7P17097 686 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 AMD1P17707 334 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 LSP1P33241 339 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SERPINB6P35237 376 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 DCTP40126 519 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CD86P42081 329 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 SCTRP47872 440 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 CCL11P51671 97 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 MAGOHP61326 146 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 OTUD4Q01804 1114 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 GBE1Q04446 702 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 GPS1Q13098 491 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ZBTB17Q13105 803 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 DPYSL3Q14195 570 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 INPP5JQ15735 1006 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 UGT8Q16880 541 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 INSCQ1MX18 579 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ANKRD20A8PQ5CZ79 823 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 DNAJC21Q5F1R6 531 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 TNFAIP8L3Q5GJ75 292 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 PRAMEF17Q5VTA0 474 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 IRGCQ6NXR0 463 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 ABRAXAS1Q6UWZ7 409 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 C4orf22Q6V702 233 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 B4GALNT4Q76KP1 1039 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 PPP1R3BQ86XI6 285 aa8.34□□□□□ -1.07
TGFBR3-208ENST00000529608 RAVER1Q8IY67 606 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms