RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CCDC138Q96M89 665 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 ZNF570Q96NI8 536 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 ZBTB18Q99592 522 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 EFHD1Q9BUP0 239 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 HDAC8Q9BY41 377 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 KLHL4Q9C0H6 718 aa14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 KIF26AQ9ULI4 1882 aaPredicted RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 YBX2Q9Y2T7 364 aaKnown RBP14.45□□□□□ -0.1
ECHDC1-220ENST00000528402 DENND4AQ7Z401 1863 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 TBC1D3BA6NDS4 549 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 LOC730098B7Z3J9 87 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 MANBAO00462 879 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 AREL1O15033 823 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 SGTAO43765 313 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 DNAJA2O60884 412 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 PSIP1O75475 530 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 SORBS2O94875 1100 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 CATP04040 527 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 ACPPP15309 386 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 CAPN3P20807 821 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 RHDQ02161 417 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 PCDH1Q08174 1060 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 BOP1Q14137 746 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 ZNF234Q14588 700 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 ABRAXAS2Q15018 415 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 C18orf21Q32NC0 220 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 BCL7AQ4VC05 210 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 CACHD1Q5VU97 1274 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 FAM109BQ6ICB4 259 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 DET1Q7L5Y6 550 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 RETREG3Q86VR2 466 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 ZFAND4Q86XD8 727 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 PQLC1Q8N2U9 271 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 DPP10Q8N608 796 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 L3MBTL4Q8NA19 623 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 FBXO15Q8NCQ5 510 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 BHLHE22Q8NFJ8 381 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 DNAJB8Q8NHS0 232 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 MYLIPQ8WY64 445 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 NXPE3Q969Y0 559 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 LRGUKQ96M69 825 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 CDK15Q96Q40 435 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 ACTR8Q9H981 624 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 HPS4Q9NQG7 708 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 DNAJC11Q9NVH1 559 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 THAP10Q9P2Z0 257 aaPredicted RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 TSR3Q9UJK0 312 aaKnown RBP14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 AP3M1Q9Y2T2 418 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 CCL27Q9Y4X3 112 aa14.44□□□□□ -0.1
ECHDC1-220ENST00000528402 C17orf113A0A1B0GUU1 675 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC5A10A0PJK1 596 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 FADS2P1A8MWK0 482 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 H3BNX3 289 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 C8BP07358 591 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ADRB3P13945 408 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 JAK1P23458 1154 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 PRPH2P23942 346 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 MAPK1P28482 360 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 IMPG1Q17R60 797 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 LIPJQ5W064 366 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 IRGCQ6NXR0 463 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 CYP20A1Q6UW02 462 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ERN2Q76MJ5 926 aaKnown RBP14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 GET4Q7L5D6 327 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 SNX31Q8N9S9 440 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 HIPK4Q8NE63 616 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ADCY4Q8NFM4 1077 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 PROKR1Q8TCW9 393 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 GDPD5Q8WTR4 605 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ARRDC3Q96B67 414 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 METTL2AQ96IZ6 378 aaKnown RBP14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 FAM129BQ96TA1 746 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ECSITQ9BQ95 431 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 MTG2Q9H4K7 406 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 GIMAP2Q9UG22 337 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 ZNF490Q9ULM2 529 aaPredicted RBP14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 TMED5Q9Y3A6 229 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 KIAA1549LQ6ZVL6 1849 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 PDE4DIPQ5VU43 2346 aa14.43□□□□□ -0.1
ECHDC1-220ENST00000528402 BPTFQ12830 3046 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 ATG2AQ2TAZ0 1938 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 PRORSD1PA6NEY8 169 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 AQP12BA6NM10 295 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 VEGFDO43915 354 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 LZTS3O60299 673 aaPredicted RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 RSL1D1O76021 490 aaKnown RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 PRPS2P11908 318 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC2A4P14672 509 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 FCARP24071 287 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 GRIA2P42262 883 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 GDF5P43026 501 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 SLC7A2P52569 658 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 EEFSECP57772 596 aaKnown RBP14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 UFM1P61960 85 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 GTF2H3Q13889 308 aa14.42□□□□□ -0.1
ECHDC1-220ENST00000528402 NFYCQ13952 458 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms