RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 CCR7P32248 378 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 MC1RQ01726 317 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ABRQ12979 859 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 LAMB3Q13751 1172 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ERV3-1Q14264 604 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ZNF789Q5FWF6 425 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 PRICKLE2Q7Z3G6 844 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 TRIM73Q86UV7 250 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 BPHLQ86WA6 291 aaPredicted RBP23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 VRK3Q8IV63 474 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 SGSM3Q96HU1 749 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 KCND1Q9NSA2 647 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ACTR10Q9NZ32 417 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ASF1AQ9Y294 204 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 ZKSCAN5Q9Y2L8 839 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 PCDHGA6Q9Y5G7 932 aa23.21■■□□□ 1.31
PACSIN3-204ENST00000528201 MATN2O00339 956 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 QSOX1O00391 747 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 SCRG1O75711 98 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 MT-ND3P03897 115 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 OR56A5P0C7T3 313 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 CCNYL3P0C7X3 344 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 CSE1LP55060 971 aaKnown RBP23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 PRAMEP78395 509 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 BASP1P80723 227 aaKnown RBP23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 GPS2Q13227 327 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 LYPLAL1Q5VWZ2 237 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 ZNF449Q6P9G9 518 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 NLRP9Q7RTR0 991 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 PPHLN1Q8NEY8 458 aaKnown RBP23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 OR1L3Q8NH93 324 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 FLVCR1-AS1Q8TAF5 88 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 PEX13Q92968 403 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 TRAPPC9Q96Q05 1148 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 FAM117AQ9C073 453 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 TREX1Q9NSU2 369 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 SPHK1Q9NYA1 384 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 PLAGL1Q9UM63 463 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 CDYLQ9Y232 598 aa23.2■■□□□ 1.3
PACSIN3-204ENST00000528201 ARNTP27540 789 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 RPS18P62269 152 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 FASTKD1Q53R41 847 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 PCID2Q5JVF3 399 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 TMTC4Q5T4D3 741 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 LCN10Q6JVE6 187 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 UNC5AQ6ZN44 842 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 TMEM126BQ8IUX1 230 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 APOBEC4Q8WW27 367 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 TWSG1Q9GZX9 223 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 ACTL8Q9H568 366 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 LATS2Q9NRM7 1088 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 TUBD1Q9UJT1 453 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 KCNMB2Q9Y691 235 aa23.19■■□□□ 1.3
PACSIN3-204ENST00000528201 C21orf140B9A014 251 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 SUV39H1O43463 412 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 CPNE3O75131 537 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 CREG1O75629 220 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 NMBRP28336 390 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 TRIP13Q15645 432 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 ZIC1Q15915 447 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 SYTL3Q4VX76 610 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 ZNF517Q6ZMY9 492 aaPredicted RBP23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 GSTA5Q7RTV2 222 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 PTRH1Q86Y79 214 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 KRT222Q8N1A0 295 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 OR8K5Q8NH50 307 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 MAIP1Q8WWC4 291 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 TRIM4Q9C037 500 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 CATSPERZQ9NTU4 200 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 KCND3Q9UK17 655 aa23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 TDRKHQ9Y2W6 561 aaKnown RBP23.18■■□□□ 1.3
PACSIN3-204ENST00000528201 C2orf74A8MZ97 194 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 HCRTR1O43613 425 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 UGT2B7P16662 529 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 MGAT1P26572 445 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 PEBP1P30086 187 aaKnown RBP23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 PLEKHS1Q5SXH7 462 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 TTC27Q6P3X3 843 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 SPESP1Q6UW49 350 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 CES3Q6UWW8 571 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 CDHR3Q6ZTQ4 885 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 TBC1D21Q8IYX1 336 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 SLC22A15Q8IZD6 547 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 LMNTD1Q8N9Z9 388 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 OR5K2Q8NHB8 316 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 OR2A14Q96R47 310 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 AP1M1Q9BXS5 423 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 CHST8Q9H2A9 424 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 FAM60AQ9NP50 221 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 SYBUQ9NX95 663 aa23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 TTC7AQ9ULT0 858 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 HEMK1Q9Y5R4 338 aaPredicted RBP23.17■■□□□ 1.3
PACSIN3-204ENST00000528201 PIPSLA2A3N6 862 aa23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 CDC14CA4D256 554 aa23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 TMEM150CB9EJG8 249 aa23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 GPC4O75487 556 aa23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 CHRM5P08912 532 aaPredicted RBP23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 MSL3P1P0C860 447 aa23.16■■□□□ 1.3
PACSIN3-204ENST00000528201 SHMT2P34897 504 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms