RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ASB8Q9H765 288 aa10.25□□□□□ -0.77
CPSF1-203ENST00000527916 AKIRIN1Q9H9L7 192 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-203ENST00000527916 FGF21Q9NSA1 209 aa10.25□□□□□ -0.77
CPSF1-203ENST00000527916 ACSL5Q9ULC5 683 aa10.25□□□□□ -0.77
CPSF1-203ENST00000527916 WDR37Q9Y2I8 494 aa10.25□□□□□ -0.77
CPSF1-203ENST00000527916 NIPBLQ6KC79 2804 aaeCLIP10.25□□□□□ -0.77
CPSF1-203ENST00000527916 SPTBP11277 2137 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 C17orf113A0A1B0GUU1 675 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 OR52A4PA6NMU1 304 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 PRSS44E7EML9 344 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 H7C0S8 307 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 LRRTM2O43300 516 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 SCRG1O75711 98 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 RAB40ALP0C0E4 278 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 PSMA3P25788 255 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 ITGA3P26006 1051 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 STIP1P31948 543 aaKnown RBP10.24□□□□□ -0.77
CPSF1-203ENST00000527916 DRG2P55039 364 aaKnown RBP10.24□□□□□ -0.77
CPSF1-203ENST00000527916 TUBB4BP68371 445 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 TUBB2AQ13885 445 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 GPR18Q14330 331 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 KCNAB1Q14722 419 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 PTPRCAPQ14761 206 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 ZRSR2Q15696 482 aaKnown RBP10.24□□□□□ -0.77
CPSF1-203ENST00000527916 SEPT7Q16181 437 aaKnown RBP10.24□□□□□ -0.77
CPSF1-203ENST00000527916 KYNUQ16719 465 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 P3H1Q32P28 736 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 GPR33Q49SQ1 333 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 BCL7AQ4VC05 210 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 ZNF517Q6ZMY9 492 aaPredicted RBP10.24□□□□□ -0.77
CPSF1-203ENST00000527916 KMT5CQ86Y97 462 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 ST6GALNAC3Q8NDV1 305 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 SLC35B2Q8TB61 432 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 TM9SF4Q92544 642 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 ULK4Q96C45 1275 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 RANBP9Q96S59 729 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 TBL1YQ9BQ87 522 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 APOL2Q9BQE5 337 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 TUBB2BQ9BVA1 445 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 NLNQ9BYT8 704 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 CHST8Q9H2A9 424 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 SEMA5BQ9P283 1151 aa10.24□□□□□ -0.77
CPSF1-203ENST00000527916 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 IGHV5-51A0A0C4DH38 117 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 OR2AG2A6NM03 316 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 GPR39O43194 453 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 LDB2O43679 373 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 SGTAO43765 313 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 METTL18O95568 372 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 PTMAP06454 111 aaKnown RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 EBLN1P0CF75 366 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 RALBP11234 206 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 AKT1P31749 480 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 ZNF140P52738 457 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 RAPSNQ13702 412 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 NFE2L1Q14494 772 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 RPE65Q16518 533 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 FNBP1LQ5T0N5 605 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 MYO7BQ6PIF6 2116 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 FAM83HQ6ZRV2 1179 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 ARHGEF18Q6ZSZ5 1173 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 GDF7Q7Z4P5 450 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 RAB43Q86YS6 212 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 ENDOVQ8N8Q3 282 aaKnown RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 OR13C4Q8NGS5 318 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 LRFN5Q96NI6 719 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 FAM118BQ9BPY3 351 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 CCM2Q9BSQ5 444 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 FRMD8P1Q9BZ68 369 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 TSGA10Q9BZW7 698 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 KCND1Q9NSA2 647 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 TRIM10Q9UDY6 481 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 FKBPLQ9UIM3 349 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
CPSF1-203ENST00000527916 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-203ENST00000527916 IGLV3-16A0A075B6K0 115 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 TRBV5-4A0A0C4DH59 114 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 A0A0U1RQJ8 604 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 UBA6A0AVT1 1052 aaPredicted RBP10.22□□□□□ -0.77
CPSF1-203ENST00000527916 ERI2A8K979 691 aaKnown RBP10.22□□□□□ -0.77
CPSF1-203ENST00000527916 GOLGA6L6A8MZA4 724 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 CFAP99D6REC4 459 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 MEN1O00255 615 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 IPO13O94829 963 aaKnown RBP10.22□□□□□ -0.77
CPSF1-203ENST00000527916 AP2A1O95782 977 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 FTCDO95954 541 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 IGHEP01854 428 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 GSTM1P09488 218 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 MTHFD1P11586 935 aaKnown RBP10.22□□□□□ -0.77
CPSF1-203ENST00000527916 ATP1B2P14415 290 aaPredicted RBP10.22□□□□□ -0.77
CPSF1-203ENST00000527916 ITGALP20701 1170 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 GLRBP48167 497 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 PRLHRP49683 370 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 HSD11B2P80365 405 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 GSTM4Q03013 218 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 GPS2Q13227 327 aa10.22□□□□□ -0.77
CPSF1-203ENST00000527916 OLIG2Q13516 323 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms