RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PADI4Q9UM07 663 aa16.11■□□□□ 0.17
CAPN1-205ENST00000526954 ASF1AQ9Y294 204 aa16.11■□□□□ 0.17
CAPN1-205ENST00000526954 CFAP20Q9Y6A4 193 aaKnown RBP16.11■□□□□ 0.17
CAPN1-205ENST00000526954 COLEC10Q9Y6Z7 277 aa16.11■□□□□ 0.17
CAPN1-205ENST00000526954 U3KQA8 63 aa16.11■□□□□ 0.17
CAPN1-205ENST00000526954 MAP2K7O14733 419 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 NUDT21O43809 227 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 SH3BP5O60239 455 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 KLHL2O95198 593 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 LDOC1O95751 146 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 VIPP01282 170 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 RPN2P04844 631 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 LTA4HP09960 611 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CKMT1AP12532 417 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CD1DP15813 335 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CCNFP41002 786 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 MAZP56270 477 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 HHEXQ03014 270 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 DLG1Q12959 904 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 SP140Q13342 867 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CSHL1Q14406 222 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 TNFAIP8L3Q5GJ75 292 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 ZNF438Q7Z4V0 828 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 PIP4P1Q86T03 277 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 TRABD2AQ86V40 505 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 LCA5Q86VQ0 697 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 CENPLQ8N0S6 344 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 FBXO15Q8NCQ5 510 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 PHC3Q8NDX5 983 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 MAGEC3Q8TD91 643 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 NETO1Q8TDF5 533 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 SETD7Q8WTS6 366 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 SH3KBP1Q96B97 665 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 FERD3LQ96RJ6 166 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 SLC12A9Q9BXP2 914 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 VPS11Q9H270 941 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 TRIT1Q9H3H1 467 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 STN1Q9H668 368 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 UCK1Q9HA47 277 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 NMRAL1Q9HBL8 299 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 IGSF5Q9NSI5 407 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 EVA1BQ9NVM1 165 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 POLG2Q9UHN1 485 aa16.1■□□□□ 0.17
CAPN1-205ENST00000526954 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 RUVBL2Q9Y230 463 aaKnown RBP16.1■□□□□ 0.17
CAPN1-205ENST00000526954 ANKRD12Q6UB98 2062 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 CCDC189A1A4V9 331 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 EME2A4GXA9 379 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 AGPSO00116 658 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 PPM1DO15297 605 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 RGS16O15492 202 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 ZBTB14O43829 449 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 C1orf105O95561 183 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 CATP04040 527 aaKnown RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 PNLIPP16233 465 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 GLB1P16278 677 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 GMPRP36959 345 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 DUSP3P51452 185 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 IRF9Q00978 393 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 NR1D2Q14995 579 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 FAM83EQ2M2I3 478 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 DUS1LQ6P1R4 473 aaKnown RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 DCUN1D3Q8IWE4 304 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 TRIM48Q8IWZ4 208 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 OR5AR1Q8NGP9 310 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 NXNL1Q96CM4 212 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 KIR3DX1Q9H7L2 352 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 TSR3Q9UJK0 312 aaKnown RBP16.09■□□□□ 0.17
CAPN1-205ENST00000526954 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
CAPN1-205ENST00000526954 PRAMEF33A0A0G2JMD5 474 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 ARHGEF33A8MVX0 844 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 FOXO6A8MYZ6 492 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 ENO2P09104 434 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-205ENST00000526954 MYZAPP0CAP1 466 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 PYGBP11216 843 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 SLC18A2Q05940 514 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 KRT33BQ14525 404 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 TSNAXIP1Q2TAA8 658 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 TTC23LQ6PF05 361 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 SBSNQ6UWP8 590 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 TMEM26Q6ZUK4 368 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 UBE2R2Q712K3 238 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-205ENST00000526954 ISCA2Q86U28 154 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 SPATA6LQ8N4H0 392 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 KCTD4Q8WVF5 259 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 DLG3Q92796 817 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 NAT6Q93015 286 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 KIAA1191Q96A73 305 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 RAD51AP1Q96B01 352 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 CNDP2Q96KP4 475 aaKnown RBP16.08■□□□□ 0.16
CAPN1-205ENST00000526954 CAMK1GQ96NX5 476 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 GPR78Q96P69 363 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 CDC6Q99741 560 aa16.08■□□□□ 0.16
CAPN1-205ENST00000526954 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-205ENST00000526954 TFB2MQ9H5Q4 396 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms