RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TC2NQ8N9U0 490 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 LMNTD1Q8N9Z9 388 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 HM13Q8TCT9 377 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 MESP1Q9BRJ9 268 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 GBA3Q9H227 469 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 TFB2MQ9H5Q4 396 aaKnown RBP13.81□□□□□ -0.2
CPSF1-201ENST00000526271 SLAMF7Q9NQ25 335 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPSF1-201ENST00000526271 LCMT1Q9UIC8 334 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 CDYLQ9Y232 598 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 PKP3Q9Y446 797 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 PRSS21Q9Y6M0 314 aa13.81□□□□□ -0.2
CPSF1-201ENST00000526271 DCHS2Q6V1P9 2916 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 TRBV5-4A0A0C4DH59 114 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 GSAPA4D1B5 854 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 E2F3O00716 465 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 LDB2O43679 373 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 PRF1P14222 555 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 PSMB4P28070 264 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 PRKG2Q13237 762 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 DCAF10Q5QP82 559 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 TMTC4Q5T4D3 741 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 VWA5B1Q5TIE3 1220 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 C1orf189Q5VU69 101 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 C1QL3Q5VWW1 255 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 MRPL14Q6P1L8 145 aaKnown RBP13.8□□□□□ -0.2
CPSF1-201ENST00000526271 IGFL3Q6UXB1 125 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 FAM20CQ8IXL6 584 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 KLHDC8BQ8IXV7 354 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 LCN9Q8WX39 176 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 SRMSQ9H3Y6 488 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-201ENST00000526271 ABHD10Q9NUJ1 306 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 DDX56Q9NY93 547 aaKnown RBP13.8□□□□□ -0.2
CPSF1-201ENST00000526271 ACTR10Q9NZ32 417 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 RSPH14Q9UHP6 348 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 PCDHGA10Q9Y5H3 936 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 POLQO75417 2590 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 AKAP9Q99996 3911 aa13.8□□□□□ -0.2
CPSF1-201ENST00000526271 CCDC66A2RUB6 948 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 ALOX12BO75342 701 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 CYP2A7P20853 494 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 NDUFS1P28331 727 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 SLC9A5Q14940 896 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 ARMC6Q6NXE6 501 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 Q6ZS92 163 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 PIANPQ8IYJ0 282 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 CLDN19Q8N6F1 224 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 OR2A14Q96R47 310 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 FERD3LQ96RJ6 166 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 C5AR2Q9P296 337 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 DHCR7Q9UBM7 475 aaKnown RBP13.79□□□□□ -0.2
CPSF1-201ENST00000526271 CELSR1Q9NYQ6 3014 aa13.79□□□□□ -0.2
CPSF1-201ENST00000526271 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 E7EQ34 232 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 AKR1B10O60218 316 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
CPSF1-201ENST00000526271 UGT2B7P16662 529 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 POU3F2P20265 443 aaPredicted RBP13.78□□□□□ -0.2
CPSF1-201ENST00000526271 ACADLP28330 430 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 SLC1A1P43005 524 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 TFDP2Q14188 446 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 RHBDD2Q6NTF9 364 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 UNC5AQ6ZN44 842 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 BBS12Q6ZW61 710 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 RHOT2Q8IXI1 618 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 KATNAL2Q8IYT4 538 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 GALNT16Q8N428 558 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 DTWD1Q8N5C7 304 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 AMER2Q8N7J2 671 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 OR5AR1Q8NGP9 310 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 RBM41Q96IZ5 413 aaKnown RBP13.78□□□□□ -0.2
CPSF1-201ENST00000526271 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 DNAJC1Q96KC8 554 aaKnown RBP13.78□□□□□ -0.2
CPSF1-201ENST00000526271 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 VAT1Q99536 393 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 CCM2Q9BSQ5 444 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 MENTQ9BUN1 341 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 SYTL2Q9HCH5 934 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 P4HTMQ9NXG6 502 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 B3GNT3Q9Y2A9 372 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 PTRH2Q9Y3E5 179 aaKnown RBP13.78□□□□□ -0.2
CPSF1-201ENST00000526271 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 MYO7BQ6PIF6 2116 aa13.78□□□□□ -0.2
CPSF1-201ENST00000526271 ADGRG4Q8IZF6 3080 aa13.77□□□□□ -0.2
CPSF1-201ENST00000526271 ANKUB1A6NFN9 424 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 BHMG1C9JSJ3 638 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms