RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	UPB1	Q9UBR1	384 aa		4.25	□□□□□ -1.73
PCM1-223	ENST00000524356	HAO1	Q9UJM8	370 aa		4.25	□□□□□ -1.73
PCM1-223	ENST00000524356	PRUNE2	Q8WUY3	3088 aa		4.25	□□□□□ -1.73
PCM1-223	ENST00000524356	SCN9A	Q15858	1988 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356		A0A087WV48	116 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356		A0A087WYN8	130 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	EDDM13	A0A1B0GTR0	161 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	LNP1	A1A4G5	178 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CTAGE9	A4FU28	777 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	OOEP	A6NGQ2	149 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SLC9B1P1	A6NJY1	282 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356		H0YC42	278 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SGK1	O00141	431 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	NDUFS3	O75489	264 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	AKAP3	O75969	853 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TRUB2	O95900	331 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	PDGFB	P01127	241 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	IGKV3-20	P01619	116 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	NPS	P0C0P6	89 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TMEM11	P17152	192 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	IGFBP2	P18065	325 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	RPS12	P25398	132 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	POU1F1	P28069	291 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TMOD1	P28289	359 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	MCM5	P33992	734 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ARCN1	P48444	511 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	DGKQ	P52824	942 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	FKBP1B	P68106	108 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CCNA1	P78396	465 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ZXDB	P98169	803 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ECT2L	Q008S8	904 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	BEX3	Q00994	111 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SP3	Q02447	781 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	GHRHR	Q02643	423 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ALKBH1	Q13686	389 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CBFB	Q13951	182 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	RNPS1	Q15287	305 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	INA	Q16352	499 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TAZ	Q16635	292 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TWISTNB	Q3B726	338 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	PCGF3	Q3KNV8	242 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	KCNT1	Q5JUK3	1230 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	HEPHL1	Q6MZM0	1159 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ARHGAP11A	Q6P4F7	1023 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	MOXD1	Q6UVY6	613 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	C15orf39	Q6ZRI6	1047 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	MOB3C	Q70IA8	216 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	PIM3	Q86V86	326 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	KLHL7	Q8IXQ5	586 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	LPCAT1	Q8NF37	534 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CFAP61	Q8NHU2	1237 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CCDC110	Q8TBZ0	833 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	URGCP	Q8TCY9	931 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	BCAS4	Q8TDM0	211 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	MRPL38	Q96DV4	380 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	LMLN	Q96KR4	655 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	RMDN2	Q96LZ7	410 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	GDAP1L1	Q96MZ0	367 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SPATA13	Q96N96	652 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ZNF558	Q96NG5	402 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	GSDMA	Q96QA5	445 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SIGLEC11	Q96RL6	698 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	EFHD1	Q9BUP0	239 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CNOT10	Q9H9A5	744 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SAP30L	Q9HAJ7	183 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	RANGRF	Q9HD47	186 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	TUFT1	Q9NNX1	390 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SERINC1	Q9NRX5	453 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	DNAJC11	Q9NVH1	559 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	LEF1	Q9UJU2	399 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	FBXW11	Q9UKB1	542 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	GABRQ	Q9UN88	632 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SH2B3	Q9UQQ2	575 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	WBP11	Q9Y2W2	641 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	CMAHP	Q9Y471	501 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	ZMYM2	Q9UBW7	1377 aa		4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-223	ENST00000524356	LRRC72	A6NJI9	287 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	C3orf70	A6NLC5	250 aa	Predicted RBP	4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	GPR89A	B7ZAQ6	455 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	FAM86B1	E9PN63	330 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	IFIT3	O14879	490 aa	Known RBP	4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	ST8SIA3	O43173	380 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	HBP1	O60381	514 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	NKX2-2	O95096	273 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	KCNK5	O95279	499 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	ADA	P00813	363 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	TGFA	P01135	160 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	HEXA	P06865	529 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	ABHD2	P08910	425 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	FAM86B2	P0C5J1	330 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	GPR89B	P0CG08	455 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	HSPA5	P11021	654 aa	Known RBP	4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	TOP1	P11387	765 aa	Known RBP	4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	CTPS1	P17812	591 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	ACHE	P22303	614 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	AHCY	P23526	432 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	CCNC	P24863	283 aa		4.23	□□□□□ -1.73
PCM1-223	ENST00000524356	CD27	P26842	260 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms