RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PRKG2Q13237 762 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 CYHR1Q6ZMK1 362 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 KIAA0408Q6ZU52 694 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 CYS1Q717R9 158 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 PRSS42Q7Z5A4 293 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 PLXDC1Q8IUK5 500 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 TBC1D21Q8IYX1 336 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ADGRF3Q8IZF5 1079 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 OR5K2Q8NHB8 316 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 CALML6Q8TD86 181 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 TMEM159Q96B96 161 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 CFAP36Q96G28 342 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 AHCYL2Q96HN2 611 aaKnown RBP11.62□□□□□ -0.55
CLN8-207ENST00000524258 PPM1MQ96MI6 270 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ZNF578Q96N58 590 aaPredicted RBP11.62□□□□□ -0.55
CLN8-207ENST00000524258 PANX3Q96QZ0 392 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 FERD3LQ96RJ6 166 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 AARSD1Q9BTE6 412 aaKnown RBP11.62□□□□□ -0.55
CLN8-207ENST00000524258 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 UTP11Q9Y3A2 253 aaKnown RBP11.62□□□□□ -0.55
CLN8-207ENST00000524258 PCDHGA7Q9Y5G6 932 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 PSAT1Q9Y617 370 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 AK5Q9Y6K8 562 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 COLEC10Q9Y6Z7 277 aa11.62□□□□□ -0.55
CLN8-207ENST00000524258 IGHV5-51A0A0C4DH38 117 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 OR6C74A6NCV1 312 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 SRRM3A6NNA2 597 aaPredicted RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 B4E171 279 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 F8W8V4 182 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 IFRD1O00458 451 aaPredicted RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 NDC80O14777 642 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 NVLO15381 856 aaKnown RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 TOX3O15405 576 aaPredicted RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 TNFSF15O95150 251 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 MATN4O95460 622 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 APOA4P06727 396 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 AMD1P17707 334 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 CD9P21926 228 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 ATP5DP30049 168 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 ECHS1P30084 290 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 TSPAN7P41732 249 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 CARSP49589 748 aaKnown RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 KPNA2P52292 529 aaKnown RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 ABRQ12979 859 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 CALCOCO2Q13137 446 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 KYNUQ16719 465 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 ACSBG2Q5FVE4 666 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 RBM20Q5T481 1227 aaKnown RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 LSMEM2Q8N112 164 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 OTUD6BQ8N6M0 293 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 LRRN4CLQ8ND94 238 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 OR4E2Q8NGC2 313 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 CD200R1Q8TD46 325 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 KCNJ9Q92806 393 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 FGF11Q92914 225 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 FAM136AQ96C01 138 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 SLC41A2Q96JW4 573 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 TGM7Q96PF1 710 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 CMKLR1Q99788 373 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 HGH1Q9BTY7 390 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 TSSK1BQ9BXA7 367 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 B3GNT4Q9C0J1 378 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 ZNF768Q9H5H4 540 aaKnown RBP11.61□□□□□ -0.55
CLN8-207ENST00000524258 XKR8Q9H6D3 395 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 HRASLS2Q9NWW9 162 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 VPS9D1Q9Y2B5 631 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 RAXQ9Y2V3 346 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 DHRS7Q9Y394 339 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 PCDHGA3Q9Y5H0 932 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 PTPRQQ9UMZ3 2332 aa11.61□□□□□ -0.55
CLN8-207ENST00000524258 A0A087WV48 116 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 A8MU76 341 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CXorf49A8MYA2 514 aaPredicted RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 AGRPO00253 132 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 BTN3A1O00481 513 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 KPNA5O15131 536 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 PRICKLE3O43900 615 aaPredicted RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 C1orf105O95561 183 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 PEBP1P30086 187 aaKnown RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 SLC5A2P31639 672 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 EIF2S3P41091 472 aaKnown RBP11.6□□□□□ -0.55
CLN8-207ENST00000524258 ABCG1P45844 678 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CDKN2DP55273 166 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 MC2RQ01718 297 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CAV1Q03135 178 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 MGAT5Q09328 741 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 ST3GAL2Q16842 350 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 CCSMST1Q4G0I0 132 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 SYTL3Q4VX76 610 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 SNAP47Q5SQN1 464 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 ZNF449Q6P9G9 518 aa11.6□□□□□ -0.55
CLN8-207ENST00000524258 UNC5DQ6UXZ4 953 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms