RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CCNFP41002 786 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 IL2P60568 153 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 DLG1Q12959 904 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 BIRC2Q13490 618 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SEPT7Q16181 437 aaKnown RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 TAF1BQ53T94 588 aaPredicted RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 LVRNQ6Q4G3 990 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 PIWIL4Q7Z3Z4 852 aaKnown RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SPATA6LQ8N4H0 392 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 FAM181AQ8N9Y4 354 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 ACMSDQ8TDX5 336 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 KCTD4Q8WVF5 259 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 UBXN10Q96LJ8 280 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 RMDN2Q96LZ7 410 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SH3GL2Q99962 352 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 WWP1Q9H0M0 922 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 ABCG4Q9H172 646 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SYTL2Q9HCH5 934 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 IGSF5Q9NSI5 407 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 PCMTD2Q9NV79 361 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 SCHIP1Q9P0W5 487 aaPredicted RBP11.65□□□□□ -0.54
PVT1-215ENST00000522963 IKZF3Q9UKT9 509 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 ACSL5Q9ULC5 683 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 ACOT9Q9Y305 439 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 U3KQA8 63 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
PVT1-215ENST00000522963 DCHS1Q96JQ0 3298 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 GOLGA6L10A6NI86 522 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 PDZK1P1A8MUH7 402 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 EIF3FO00303 357 aaPredicted RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 ATP8B1O43520 1251 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 BRAFP15056 766 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CREB1P16220 341 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 ACADLP28330 430 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 RGS4P49798 205 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 ABRQ12979 859 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CSHL1Q14406 222 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CLCA4Q14CN2 919 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 PERM1Q5SV97 790 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CAPRIN2Q6IMN6 1127 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 WASH2PQ6VEQ5 465 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 NEK10Q6ZWH5 1172 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 CLEC14AQ86T13 490 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 TBC1D1Q86TI0 1168 aaPredicted RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 SRRM1Q8IYB3 904 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 CENPLQ8N0S6 344 aaPredicted RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 C4orf33Q8N1A6 199 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 PLD6Q8N2A8 252 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 ARL10Q8N8L6 244 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 MAPK15Q8TD08 544 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 ZDHHC1Q8WTX9 485 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 NXNL1Q96CM4 212 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 PDLIM5Q96HC4 596 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 CABS1Q96KC9 395 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 INSM2Q96T92 566 aaPredicted RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 WASH6PQ9NQA3 447 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 NCKIPSDQ9NZQ3 722 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
PVT1-215ENST00000522963 PCDHGA1Q9Y5H4 931 aa11.64□□□□□ -0.55
PVT1-215ENST00000522963 OPA1O60313 960 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 LTA4HP09960 611 aaKnown RBP11.63□□□□□ -0.55
PVT1-215ENST00000522963 SLC35G4P0C7Q5 338 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 JUPP14923 745 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 CD1DP15813 335 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 KRT4P19013 534 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 SLC26A3P40879 764 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 PPM1FP49593 454 aaPredicted RBP11.63□□□□□ -0.55
PVT1-215ENST00000522963 MAZP56270 477 aaKnown RBP11.63□□□□□ -0.55
PVT1-215ENST00000522963 E2F1Q01094 437 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 TTMPQ5BVD1 217 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 HES3Q5TGS1 186 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 AGBL2Q5U5Z8 902 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 ABRAXAS1Q6UWZ7 409 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 MYO1HQ8N1T3 1032 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 Q8N9G6 341 aaPredicted RBP11.63□□□□□ -0.55
PVT1-215ENST00000522963 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
PVT1-215ENST00000522963 PATE1Q8WXA2 126 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 CCDC74AQ96AQ1 378 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 TLCD1Q96CP7 247 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 GPR78Q96P69 363 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 DERL2Q9GZP9 239 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 ACBD3Q9H3P7 528 aa11.63□□□□□ -0.55
PVT1-215ENST00000522963 ZNF358Q9NW07 568 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms