RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ZNF423Q2M1K9 1284 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 FAM46CQ5VWP2 391 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TTC23LQ6PF05 361 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TCAIMQ8N3R3 496 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 ZNF513Q8N8E2 541 aaPredicted RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TMEM159Q96B96 161 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 C1orf50Q9BV19 199 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 OR2AG1Q9H205 316 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 EPHX3Q9H6B9 360 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 CCL27Q9Y4X3 112 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 ARHGEF33A8MVX0 844 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 NR5A2O00482 541 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 MRASO14807 208 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 PSIP1O75475 530 aaKnown RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 GSTM1P09488 218 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 EBLN1P0CF75 366 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 MTHFRP42898 656 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 MRPL19P49406 292 aaKnown RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 AP1S2P56377 157 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TAS2R38P59533 333 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 PSME3P61289 254 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 GSTM4Q03013 218 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 CAMK2GQ13555 558 aaPredicted RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 RPS6KA2Q15349 733 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 PTCHD3Q3KNS1 767 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 SYTL3Q4VX76 610 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 RETREG3Q86VR2 466 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 CHCHD4Q8N4Q1 142 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 GLMNQ92990 594 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 PYCR2Q96C36 320 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 TEX37Q96LM6 180 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 SERPINI1Q99574 410 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 BRINP2Q9C0B6 783 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 RSPH9Q9H1X1 276 aaPredicted RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 SLC52A3Q9NQ40 469 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 STX18Q9P2W9 335 aaKnown RBP16.46■□□□□ 0.23
SREK1-212ENST00000522912 TRPS1Q9UHF7 1281 aa16.46■□□□□ 0.23
SREK1-212ENST00000522912 SYNCRIPO60506 623 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 CAPN3P20807 821 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 PDHA2P29803 388 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 KIR2DL1P43626 348 aaPredicted RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 ZFP36L2P47974 494 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 HNMTP50135 292 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 SEC13P55735 322 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 CST6Q15828 149 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 CCDC6Q16204 474 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 ATP6AP1LQ52LC2 224 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 NEK5Q6P3R8 708 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 LRRC70Q7Z2Q7 622 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 PLA2G15Q8NCC3 412 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 MSLNLQ96KJ4 702 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 ZNF576Q9H609 170 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 FARSBQ9NSD9 589 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 ATXN10Q9UBB4 475 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 KLQ9UEF7 1012 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 WDR47O94967 919 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 XRCC1P18887 633 aaPredicted RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 TIE1P35590 1138 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 IRX1P78414 480 aaPredicted RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 VPS26BQ4G0F5 336 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 WLSQ5T9L3 541 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 BLOC1S3Q6QNY0 202 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 SLC22A15Q8IZD6 547 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 RNF148Q8N7C7 305 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 FNDC5Q8NAU1 212 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 FBXL8Q96CD0 374 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 TACO1Q9BSH4 297 aaKnown RBP16.45■□□□□ 0.22
SREK1-212ENST00000522912 TRIM39Q9HCM9 518 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 SERGEFQ9UGK8 458 aa16.45■□□□□ 0.22
SREK1-212ENST00000522912 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 PABPN1LA6NDY0 278 aaKnown RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 IGLON5A6NGN9 336 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 E7ENX8 843 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 MANBAO00462 879 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 MSX2P35548 267 aaPredicted RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 TNFRSF4P43489 277 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 PTDSS1P48651 473 aaKnown RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 SESN3P58005 492 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 UFM1P61960 85 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 SLC34A1Q06495 639 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 GRIK2Q13002 908 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 HTR4Q13639 388 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 NR6A1Q15406 480 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 CCSMST1Q4G0I0 132 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 SLC44A4Q53GD3 710 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 C8orf82Q6P1X6 216 aaPredicted RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.44■□□□□ 0.22
SREK1-212ENST00000522912 HACD2Q6Y1H2 254 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 RNF165Q6ZSG1 346 aa16.44■□□□□ 0.22
SREK1-212ENST00000522912 MTSS1LQ765P7 747 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms