RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	TPD52	P55327	224 aa	Predicted RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ST8SIA6	P61647	398 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RUNX1T1	Q06455	604 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DSC1	Q08554	894 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TNK1	Q13470	666 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CUL3	Q13618	768 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TAZ	Q16635	292 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KBTBD12	Q3ZCT8	623 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	XKR9	Q5GH70	373 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TXNRD3NB	Q6F5E7	133 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	NOTUM	Q6P988	496 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF449	Q6P9G9	518 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMPRSS11B	Q86T26	416 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RNF113B	Q8IZP6	322 aa	Known RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	C1orf87	Q8N0U7	546 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PGBD5	Q8N414	524 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ANKRD13C	Q8N6S4	541 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PRR26	Q8N8Z3	221 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SYN2	Q92777	582 aa	Predicted RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TANK	Q92844	425 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SEMA4D	Q92854	862 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ABTB1	Q969K4	478 aa	Predicted RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MTBP	Q96DY7	904 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	AK8	Q96MA6	479 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	OR1F2P	Q96R84	312 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLC5A7	Q9GZV3	580 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CDH20	Q9HBT6	801 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052		Q9N2K0	584 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TCP11L1	Q9NUJ3	509 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DNAJC17	Q9NVM6	304 aa	Known RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	HIF1AN	Q9NWT6	349 aa		4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.8	□□□□□ -1.64
CTNNA1-233	ENST00000522052	IGLV5-52	A0A0A0MRZ9	124 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KCNJ13	O60928	360 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FCGR3B	O75015	233 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CLDN14	O95500	239 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPP1	P10451	314 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PSG1	P11464	419 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MYOD1	P15172	320 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ITIH1	P19827	911 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KHK	P50053	298 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BRWD1-AS2	P59051	145 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DLK1	P80370	383 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BNC1	Q01954	994 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF155	Q12901	538 aa	Predicted RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RPA4	Q13156	261 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF234	Q14588	700 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LASP1	Q14847	261 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SLC39A12	Q504Y0	691 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM35A	Q53FP2	167 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SETMAR	Q53H47	684 aa	Predicted RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LRRC73	Q5JTD7	316 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPOUT1	Q5T280	376 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TRNP1	Q6NT89	227 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KLC3	Q6P597	504 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM270	Q6UE05	265 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	NHLRC1	Q6VVB1	395 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMPRSS12	Q86WS5	348 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM114A1	Q8IWE2	563 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SRRM1	Q8IYB3	904 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CLYBL	Q8N0X4	340 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	GBGT1	Q8N5D6	347 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPATA22	Q8NHS9	363 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	B4GALNT2	Q8NHY0	566 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SPATA20	Q8TB22	786 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM216A	Q8WUB2	273 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM255B	Q8WV15	326 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SSMEM1	Q8WWF3	244 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	DAZL	Q92904	295 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RPL36AL	Q969Q0	106 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PHF21A	Q96BD5	680 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	STAMBPL1	Q96FJ0	436 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BSCL2	Q96G97	398 aa	Predicted RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	HNRNPAB	Q99729	332 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	CACNG6	Q9BXT2	260 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	IARS2	Q9NSE4	1012 aa	Known RBP	4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TMEM30A	Q9NV96	361 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MOSPD1	Q9UJG1	213 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MTUS1	Q9ULD2	1270 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	NES	P48681	1621 aa		4.79	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PDS5A	Q29RF7	1337 aa	Known RBP	4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	HYKK	A2RU49	373 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SDR42E2	A6NKP2	422 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	SOCS2	O14508	198 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	KDM4B	O94953	1096 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	LUC7L3	O95232	432 aa	Known RBP	4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	OLFM2	O95897	454 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FAM106CP	P0CH98	169 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	EPCAM	P16422	314 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	POLR2C	P19387	275 aa	Predicted RBP	4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	FRK	P42685	505 aa	Predicted RBP	4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	PSMC4	P43686	418 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	RGS7	P49802	495 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MFAP3	P55082	362 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	BPIFB3	P59826	476 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	MAT1A	Q00266	395 aa	Known RBP	4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TEF	Q10587	303 aa		4.78	□□□□□ -1.64
CTNNA1-233	ENST00000522052	TRAF2	Q12933	501 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms