RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 OR2L8Q8NGY9 312 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 FLVCR1-AS1Q8TAF5 88 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 SLC22A18Q96BI1 424 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 IMP3Q9NV31 184 aaKnown RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZC3H7BQ9UGR2 993 aaKnown RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZNF839A8K0R7 811 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 C2orf74A8MZ97 194 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 GOLGA8MH3BSY2 632 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 MYO1CO00159 1063 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 RASGRF2O14827 1237 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 TLX3O43711 291 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 PRICKLE3O43900 615 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 TPBGLP0DKB5 382 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 FGF3P11487 239 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 AMD1P17707 334 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 PBLDP30039 288 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 MGAT5Q09328 741 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 CCDC157Q569K6 752 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 NKAIN2Q5VXU1 208 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZNF549Q6P9A3 640 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZDHHC24Q6UX98 284 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 AMIGO1Q86WK6 493 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 IGDCC3Q8IVU1 814 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 LILRA3Q8N6C8 439 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 LKAAEAR1Q8TD35 194 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 NCSTNQ92542 709 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 LRFN5Q96NI6 719 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZDHHC18Q9NUE0 388 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ICKQ9UPZ9 632 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 PCDHB11Q9Y5F2 797 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 MAD1L1Q9Y6D9 718 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 AK5Q9Y6K8 562 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 BPTFQ12830 3046 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 GFYI3L273 518 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 TNFSF15O95150 251 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 LIPCP11150 499 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 RAB28P51157 221 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CLDN6P56747 220 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 ACY1Q03154 408 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C2orf54Q08AI8 447 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 AMZ1Q400G9 498 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CCDC91Q7Z6B0 441 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 LSM14AQ8ND56 463 aaKnown RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 RAD51AP1Q96B01 352 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C16orf45Q96MC5 204 aaPredicted RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 PSMD13Q9UNM6 376 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C9orf172C9J069 976 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 RRP8O43159 456 aaKnown RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 C1orf105O95561 183 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 DLGAP3O95886 979 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C1QAP02745 245 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 JMJD7P0C870 316 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 PREPP48147 710 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CSE1LP55060 971 aaKnown RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 TUBB4BP68371 445 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 HSD11B2P80365 405 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 PRKAA1Q13131 559 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 TCEA2Q15560 299 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C3orf38Q5JPI3 329 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 DCAF12Q5T6F0 453 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 PHF19Q5T6S3 580 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 FAM45BPQ6NSW5 357 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CES3Q6UWW8 571 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 OTOAQ7RTW8 1153 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 RAB42Q8N4Z0 105 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 FAM45AQ8TCE6 357 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 LCN9Q8WX39 176 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 RSC1A1Q92681 617 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 FOPNLQ96NB1 174 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 SRMSQ9H3Y6 488 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 TMEM9Q9P0T7 183 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 SNX24Q9Y343 169 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 PIKFYVEQ9Y2I7 2098 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 TRBV23OR9-2A0A075B6M9 112 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CCDC78A2IDD5 438 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 VPS26AO75436 327 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 MT-ND3P03897 115 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 FDXRP22570 491 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 MAP4P27816 1152 aaKnown RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 SLC5A2P31639 672 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 EIF3BP55884 814 aaKnown RBP9.18□□□□□ -0.94
CLK4-209ENST00000521621 TIAL1Q01085 375 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLK4-209ENST00000521621 BBS9Q3SYG4 887 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 ARMC6Q6NXE6 501 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 USP53Q70EK8 1073 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CD200R1Q8TD46 325 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 L2HGDHQ9H9P8 463 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 HRASLS2Q9NWW9 162 aa9.18□□□□□ -0.94
CLK4-209ENST00000521621 CTAGE15A4D2H0 777 aa9.17□□□□□ -0.94
CLK4-209ENST00000521621 FAM159BA6NKW6 160 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms