RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 KCTD11Q693B1 232 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 LVRNQ6Q4G3 990 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 MARK2Q7KZI7 788 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TAOK1Q7L7X3 1001 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TECPR1Q7Z6L1 1165 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 FAM129CQ86XR2 697 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 IGDCC3Q8IVU1 814 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 PALM2Q8IXS6 379 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 IFT20Q8IY31 132 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 RBFAQ8N0V3 343 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 RAB42Q8N4Z0 105 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 WDR48Q8TAF3 677 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 ZNF398Q8TD17 642 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 NAT6Q93015 286 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 SH3KBP1Q96B97 665 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CENPTQ96BT3 561 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 SGSM3Q96HU1 749 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 DNAJC1Q96KC8 554 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 ERP44Q9BS26 406 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CARD6Q9BX69 1037 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TEX101Q9BY14 249 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CLPBQ9H078 707 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 DPH5Q9H2P9 285 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TRIM39Q9HCM9 518 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 PPANQ9NQ55 473 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CATSPERZQ9NTU4 200 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TMEM74BQ9NUR3 256 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 NLE1Q9NVX2 485 aaPredicted RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 SMOXQ9NWM0 555 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 TRNAU1APQ9NX07 287 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 NLGN3Q9NZ94 848 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 IL17CQ9P0M4 197 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CGGBP1Q9UFW8 167 aaPredicted RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 ZNHIT2Q9UHR6 403 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 SF3B6Q9Y3B4 125 aaKnown RBP5.85□□□□□ -1.47
FAM49B-218ENST00000520887 EMC9Q9Y3B6 208 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 CSNK1G3Q9Y6M4 447 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 RPS6KL1Q9Y6S9 549 aa5.85□□□□□ -1.47
FAM49B-218ENST00000520887 ABCA7Q8IZY2 2146 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TP53BP1Q12888 1972 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 FAM237BA0A1B0GVD1 139 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 UBA6A0AVT1 1052 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 CCDC78A2IDD5 438 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 OR5K4A6NMS3 321 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 C4orf47A7E2U8 309 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 H7C0S8 307 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 AGRPO00253 132 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TPP1O14773 563 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 RAD51BO15315 384 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 FFAR2O15552 330 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 GRID2O43424 1007 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 RAD51CO43502 376 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 BUD23O43709 281 aaKnown RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ZNF500O60304 480 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 SDC3O75056 442 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 DNAJC6O75061 913 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 PIAS2O75928 621 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 USP1O94782 785 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 AP2A2O94973 939 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 SEC31AO94979 1220 aaKnown RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 LDOC1O95751 146 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 RPN2P04844 631 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 APOA4P06727 396 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 GSTA2P09210 222 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 SLC35G4P0C7Q5 338 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TPH1P17752 444 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 OGNP20774 298 aaKnown RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 IDSP22304 550 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 MGAT1P26572 445 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 STX2P32856 288 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TRIM23P36406 574 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ACTR1BP42025 376 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 MAGEA6P43360 314 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 RXRGP48443 463 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 NOVA1P51513 510 aaKnown RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ZNF140P52738 457 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ITGA8P53708 1063 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 SLC12A2P55011 1212 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ACTR1AP61163 376 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 CUL1Q13616 776 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 FGL2Q14314 439 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 PUM1Q14671 1186 aaKnown RBP eCLIP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 LONRF1Q17RB8 773 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TTLL9Q3SXZ7 439 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 SPANXN3Q5MJ09 141 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TEX35Q5T0J7 233 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 PTRHD1Q6GMV3 140 aaKnown RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 KIAA0930Q6ICG6 404 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TCEAL6Q6IPX3 200 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 UGT3A1Q6NUS8 523 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TTC27Q6P3X3 843 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 TTC23LQ6PF05 361 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 LAYNQ6UX15 382 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 CYP2R1Q6VVX0 501 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 RPTNQ6XPR3 784 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 CHST15Q7LFX5 561 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ZNF572Q7Z3I7 529 aaPredicted RBP5.84□□□□□ -1.47
FAM49B-218ENST00000520887 CCDC25Q86WR0 208 aa5.84□□□□□ -1.47
FAM49B-218ENST00000520887 ZNF227Q86WZ6 799 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms