RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 LIPIQ6XZB0 460 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.47□□□□□ -1.694e-10■■■■□ 24.7
PABPC1-212ENST00000519622 KDELC2Q7Z4H8 507 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RNF180Q86T96 592 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CUZD1Q86UP6 607 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PROSER1Q86XN7 944 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 THNSL2Q86YJ6 484 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 DSELQ8IZU8 1212 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 LGI2Q8N0V4 545 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PGAM4Q8N0Y7 254 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 CFAP52Q8N1V2 620 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FBXW8Q8N3Y1 598 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ATP6V0D2Q8N8Y2 350 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GPATCH11Q8N954 259 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 OR9I1Q8NGQ6 314 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PPP1R14CQ8TAE6 165 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 AGR3Q8TD06 166 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 LKAAEAR1Q8TD35 194 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF483Q8TF39 744 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PYDC1Q8WXC3 89 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 MCUR1Q96AQ8 359 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF689Q96CS4 500 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PABPC5Q96DU9 382 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SGF29Q96ES7 293 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 DUS3LQ96G46 650 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 RILPQ96NA2 401 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PPP1R2P1Q96PQ5 205 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PSKH2Q96QS6 385 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 SLC22A12Q96S37 553 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 UHRF1Q96T88 793 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 MYCBPQ99417 103 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF184Q99676 751 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FERMT1Q9BQL6 677 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 TDRD1Q9BXT4 1180 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ILKAPQ9H0C8 392 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 P2RY12Q9H244 342 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 EBF3Q9H4W6 596 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 POPDC3Q9HBV1 291 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 FBRSL1Q9HCM7 1045 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 BATF3Q9NR55 127 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 OLA1Q9NTK5 396 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NLE1Q9NVX2 485 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 NCKIPSDQ9NZQ3 722 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 STK39Q9UEW8 545 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 GIMAP2Q9UG22 337 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 MID2Q9UJV3 735 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PRPF19Q9UMS4 504 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 APOBEC2Q9Y235 224 aaKnown RBP4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PMF1-BGLAPU3KQ54 211 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 PLXNA2O75051 1894 aa4.47□□□□□ -1.69
PABPC1-212ENST00000519622 ALPK3Q96L96 1907 aa4.46□□□□□ -1.69
PABPC1-212ENST00000519622 LOC100653049A0A140TA62 436 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 A0A1B0GTW7 788 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 TCRBV3S1A0A5B6 114 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 ILVBLA1L0T0 632 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 RGSL1A5PLK6 1076 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 C2orf78A6NCI8 922 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 PRORSD1PA6NEY8 169 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 H7C0S8 307 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 UBXN8O00124 270 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 RFXAPO00287 272 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 DLGAP1O14490 977 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 KDELR3O43731 214 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 AP1G1O43747 822 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 PEX1O43933 1283 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 SNAP91O60641 907 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CLASP2O75122 1294 aaKnown RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 TADA2AO75478 443 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 ZNF821O75541 412 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 BCAS2O75934 225 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 KRT34O76011 436 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 IPO13O94829 963 aaKnown RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 SIX3O95343 332 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 FGF4P08620 206 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 TSPAN8P19075 237 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CAPN3P20807 821 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 IMPDH1P20839 514 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 ATP6V1B2P21281 511 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 SAT1P21673 171 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CD9P21926 228 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 PAX7P23759 505 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 PRDX3P30048 256 aaKnown RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 AFF3P51826 1226 aaKnown RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 PLK1P53350 603 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 EPHB1P54762 984 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 AQP4P55087 323 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CDH4P55283 916 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 ITGA1P56199 1179 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 HTRA3P83110 453 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 NOGQ13253 232 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 GRB7Q14451 532 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 POLD3Q15054 466 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 ACAP2Q15057 778 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 USP41Q3LFD5 358 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 TCHHL1Q5QJ38 904 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-212ENST00000519622 C1orf146Q5VVC0 180 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CD276Q5ZPR3 534 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 REP15Q6BDI9 236 aa4.46□□□□□ -1.7
PABPC1-212ENST00000519622 CLEC6AQ6EIG7 209 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms