RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CFAP206Q8IYR0 622 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 C19orf47Q8N9M1 422 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 HM13Q8TCT9 377 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 RBM41Q96IZ5 413 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 VPS50Q96JG6 964 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 OLFM3Q96PB7 478 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 HSD3B7Q9H2F3 369 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 MRM3Q9HC36 420 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 SLC6A20Q9NP91 592 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 FAM153AQ9UHL3 310 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 FBXL4Q9UKA2 621 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 CDYLQ9Y232 598 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 MTORP42345 2549 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 MED13LQ71F56 2210 aa11.07□□□□□ -0.64
TRAPPC9-203ENST00000517667 C17orf113A0A1B0GUU1 675 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 H3BMH7 237 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 GAPDHSO14556 408 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 PROSCO94903 275 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 POLBP06746 335 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 PVRP15151 417 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 MMP11P24347 488 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 KDELR1P24390 212 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 INAQ16352 499 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 STX1AQ16623 288 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZNF630Q2M218 657 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 FILIP1LQ4L180 1135 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 TEX44Q53QW1 395 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 VWA2Q5GFL6 755 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 SIRPB2Q5JXA9 342 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 SLC9A4Q6AI14 798 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 SPESP1Q6UW49 350 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 RPTNQ6XPR3 784 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 AMIGO1Q86WK6 493 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZNF808Q8N4W9 903 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 OR52E1Q8NGJ3 308 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZNF398Q8TD17 642 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 BLOC1S5Q8TDH9 187 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 DENND1AQ8TEH3 1009 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 FKBP10Q96AY3 582 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 DCUN1D1Q96GG9 259 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 TEKT5Q96M29 485 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 FERD3LQ96RJ6 166 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 NDC1Q9BTX1 674 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 MAK16Q9BXY0 300 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 LHPPQ9H008 270 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 DEF6Q9H4E7 631 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 MVB12BQ9H7P6 319 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 WDR54Q9H977 334 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 ACTR10Q9NZ32 417 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 UBP1Q9NZI7 540 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 CDC23Q9UJX2 597 aa11.06□□□□□ -0.64
TRAPPC9-203ENST00000517667 LRRD1A4D1F6 860 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 MASP2O00187 686 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 APOL1O14791 398 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 CNOT3O75175 753 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 HTR1EP28566 365 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 CD151P48509 253 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 PRLHRP49683 370 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 WNT3AP56704 352 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 TAS2R40P59535 323 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 SLC9A5Q14940 896 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 PRKD1Q15139 912 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ZNF449Q6P9G9 518 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ISLR2Q6UXK2 745 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ADGRF3Q8IZF5 1079 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 DLG3Q92796 817 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 TRIM56Q9BRZ2 755 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 VPS37BQ9H9H4 285 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 IRAK4Q9NWZ3 460 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 UVRAGQ9P2Y5 699 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 DHCR7Q9UBM7 475 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 ITGB1BP2Q9UKP3 347 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 PKDREJQ9NTG1 2253 aa11.05□□□□□ -0.64
TRAPPC9-203ENST00000517667 CNTRLQ7Z7A1 2325 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 PCDH17O14917 1159 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 SRP72O76094 671 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 ALBP02768 609 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 PIM1P11309 404 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 PTPN3P26045 913 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 SSTR2P30874 369 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 SHMT2P34897 504 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 GABRA4P48169 554 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 TDGF1P3P51864 188 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 RPA4Q13156 261 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 MFAP5Q13361 173 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 NOMO1Q15155 1222 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 SLC1A5Q15758 541 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 DEFB110Q30KQ9 67 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 TUBB8Q3ZCM7 444 aa11.04□□□□□ -0.64
TRAPPC9-203ENST00000517667 FIGNQ5HY92 759 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms