RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 PCDHGA12O60330 932 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 BANF1O75531 89 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 POP7O75817 140 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 VAPBO95292 243 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FKBP9O95302 570 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GOT2P00505 430 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FUCA1P04066 466 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 IVLP07476 585 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ANXA6P08133 673 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GSTM1P09488 218 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RHOXF2BP0C7M4 288 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PRSS56P0CW18 603 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RALBP11234 206 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 DGKAP23743 735 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 EPHA8P29322 1005 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CA5AP35218 305 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PPARGP37231 505 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 DRG2P55039 364 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 IL2P60568 153 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CAV1Q03135 178 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CACNG1Q06432 222 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PDIA2Q13087 525 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SLC14A1Q13336 389 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NFATC2Q13469 925 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 THOC5Q13769 683 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ELOCQ15369 112 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GPR33Q49SQ1 333 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ANKRD20A4Q4UJ75 823 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 LDLRAP1Q5SW96 308 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GPRC6AQ5T6X5 926 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 KCTD16Q68DU8 428 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 AFTPHQ6ULP2 937 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 MICALCLQ6ZW33 695 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FKBP9P1Q75LS8 142 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 DET1Q7L5Y6 550 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SDCCAG8Q86SQ7 713 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 LDB1Q86U70 411 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SERPINA9Q86WD7 417 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CCDC25Q86WR0 208 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GKN2Q86XP6 184 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GALNT13Q8IUC8 556 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PHYKPLQ8IUZ5 450 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PALM2Q8IXS6 379 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 EID2Q8N6I1 236 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PNPLA1Q8N8W4 532 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RCBTB1Q8NDN9 531 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FAM46DQ8NEK8 389 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 OR13J1Q8NGT2 312 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CCL4L1Q8NHW4 92 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NETO1Q8TDF5 533 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SAP25Q8TEE9 199 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NAT14Q8WUY8 206 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 HEXDCQ8WVB3 486 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GATA6Q92908 595 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PEX13Q92968 403 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ART4Q93070 314 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ULK4Q96C45 1275 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SGF29Q96ES7 293 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CFAP36Q96G28 342 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PDXPQ96GD0 296 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 VPS35Q96QK1 796 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 COPS8Q99627 209 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 EBNA1BP2Q99848 306 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 C19orf43Q9BQ61 176 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RHOXF2Q9BQY4 288 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GSDMCQ9BYG8 508 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 TMEM168Q9H0V1 697 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 DPEP2Q9H4A9 486 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RMI1Q9H9A7 625 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 MRM3Q9HC36 420 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SAYSD1Q9NPB0 183 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FAM114A2Q9NRY5 505 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 TREX1Q9NSU2 369 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GPATCH2Q9NW75 528 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 UCKL1Q9NWZ5 548 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ZIM2Q9NZV7 527 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GULP1Q9UBP9 304 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ZC3H7BQ9UGR2 993 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 RIMKLBQ9ULI2 386 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PNMA8BQ9ULN7 279 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PCDHGB2Q9Y5G2 931 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 USP34Q70CQ2 3546 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PLXNA2O75051 1894 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ATRXP46100 2492 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 TRBV23OR9-2A0A075B6M9 112 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 OR2AG2A6NM03 316 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SLC30A4O14863 429 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 KMOO15229 486 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FLRT2O43155 660 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 VEGFDO43915 354 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SNX2O60749 519 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PEX14O75381 377 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NDUFS3O75489 264 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 USP1O94782 785 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SCGB1D2O95969 90 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 POLBP06746 335 aa5.7□□□□□ -1.5
SCARNA6.1-201ENST00000516989 ZNF883P0CG24 379 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms