RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 Q0VFX4 171 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MPP3Q13368 585 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 XRCC4Q13426 336 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SEMA3AQ14563 771 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 NCF4Q15080 339 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 NR6A1Q15406 480 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TAF1AQ15573 450 aaPredicted RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DBN1Q16643 649 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ANKRD20A2Q5SQ80 823 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ANKRD20A1Q5TYW2 823 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ANKRD20A3Q5VUR7 823 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MRPL14Q6P1L8 145 aaKnown RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 UNC5AQ6ZN44 842 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 COX15Q7KZN9 410 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MRGPREQ86SM8 312 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PRUNE1Q86TP1 453 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SERPINA9Q86WD7 417 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC50Q8IVM0 306 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DNAJC22Q8N4W6 341 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LINC01555Q8NAE3 123 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 THAP4Q8WY91 577 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZNF778Q96MU6 729 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CD180Q99467 661 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HGH1Q9BTY7 390 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MAK16Q9BXY0 300 aaKnown RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LACRTQ9GZZ8 138 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DEF6Q9H4E7 631 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TFB2MQ9H5Q4 396 aaKnown RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACTR5Q9H9F9 607 aaPredicted RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 C1GALT1Q9NS00 363 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DHCR7Q9UBM7 475 aaKnown RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACSL5Q9ULC5 683 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DOCK10Q96BY6 2186 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 E2F3O00716 465 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PSTPIP1O43586 416 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PYGMP11217 842 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ATP1B2P14415 290 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 UGT2B7P16662 529 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZFXP17010 805 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 POU3F2P20265 443 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MCM3P25205 808 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 AKT1P31749 480 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MC4RP32245 332 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SLC1A1P43005 524 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 RPS15P62841 145 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GTF2H3Q13889 308 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LONRF2Q1L5Z9 754 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TFDP3Q5H9I0 405 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 FHL5Q5TD97 284 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OOSP2Q86WS3 158 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TAB3Q8N5C8 712 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 C2orf73Q8N5S3 287 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HM13Q8TCT9 377 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZFPM2Q8WW38 1151 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LCN9Q8WX39 176 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PNPLA2Q96AD5 504 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 RBM41Q96IZ5 413 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TTC25Q96NG3 672 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 FERD3LQ96RJ6 166 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PCNX1Q96RV3 2341 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SRMSQ9H3Y6 488 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACSS2Q9NR19 701 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SOHLH2Q9NX45 425 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DDX56Q9NY93 547 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACTR10Q9NZ32 417 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HACD3Q9P035 362 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 STOX2Q9P2F5 926 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SLC2A6Q9UGQ3 507 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 RSPH14Q9UHP6 348 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SNX7Q9UNH6 387 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ANKRD12Q6UB98 2062 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SPG11Q96JI7 2443 aa7.99□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PKDREJQ9NTG1 2253 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SLC5A10A0PJK1 596 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GSAPA4D1B5 854 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 APOC4-APOC2K7ER74 178 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SPOPO43791 374 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 VPS4BO75351 444 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZRANB2O95218 330 aaKnown RBP eCLIP7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 APOC2P02655 101 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 VCLP18206 1134 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CDH3P22223 829 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OTX2P32243 289 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MAGEA1P43355 309 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ITGA9Q13797 1035 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TFDP2Q14188 446 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BRD3Q15059 726 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HIF1AQ16665 826 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCSMST1Q4G0I0 132 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC38Q502W7 563 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DCAF10Q5QP82 559 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 FCRL6Q6DN72 434 aa7.98□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC70Q6NSX1 233 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms