RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 THOC3Q96J01 351 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 HSFY1Q96LI6 401 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DACH2Q96NX9 599 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MRPL45Q9BRJ2 306 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DESI2Q9BSY9 194 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 NAA15Q9BXJ9 866 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DUSP16Q9BY84 665 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 B3GNT5Q9BYG0 378 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 IRX2Q9BZI1 471 aaPredicted RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF518BQ9C0D4 1074 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MIS12Q9H081 205 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 NUCKS1Q9H1E3 243 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SMYD3Q9H7B4 428 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 LRRC4Q9HBW1 653 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 ARFGAP3Q9NP61 516 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC6A20Q9NP91 592 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 UBE2TQ9NPD8 197 aaPredicted RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DMAP1Q9NPF5 467 aaPredicted RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CLIC5Q9NZA1 410 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CWC15Q9P013 229 aaKnown RBP3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 STIM2Q9P246 746 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 HESX1Q9UBX0 185 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC25A13Q9UJS0 675 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 CDC23Q9UJX2 597 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 MKL2Q9ULH7 1088 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 PCDHGC3Q9UN70 934 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SCML2Q9UQR0 700 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 JRKLQ9Y4A0 524 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 USP3Q9Y6I4 520 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 DGKBQ9Y6T7 804 aa3.04□□□□□ -1.92
SCARNA13-201ENST00000516672 SH3D21A4FU49 640 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SOWAHDA6NJG2 315 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 AGPSO00116 658 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 TULP1O00294 542 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FOXN3O00409 490 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 TOR1BO14657 336 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 XPO1O14980 1071 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ZSCAN12O43309 604 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SSX4O60224 188 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GFPT2O94808 682 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FBXO21O94952 628 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 LSM8O95777 96 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 OPN1MWP04001 364 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 KLK3P07288 261 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM157BP0CG42 384 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 OPN1MW2P0DN77 364 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 OPN1MW3P0DN78 364 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GLI4P10075 376 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC9A1P19634 815 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 PTGER1P34995 402 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 HADHAP40939 763 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GPD2P43304 727 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ACADSBP45954 432 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FNTAP49354 379 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 STK19P49842 368 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 PEX5P50542 639 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 AGFG1P52594 562 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GTF2A1P52655 376 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 KIF11P52732 1056 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GNG11P61952 73 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 PSMC1P62191 440 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SORDQ00796 357 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ECT2LQ008S8 904 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CYP27A1Q02318 531 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 UBXN1Q04323 297 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 BST2Q10589 180 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 EIF4EBP2Q13542 120 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CASP8Q14790 479 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNHIT3Q15649 155 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 RAB41Q5JT25 222 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ACBD5Q5T8D3 534 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SPOPLQ6IQ16 392 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 WDR93Q6P2C0 686 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FIGLAQ6QHK4 219 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 TMEM270Q6UE05 265 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM198BQ6UWH4 519 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 TRIM72Q6ZMU5 477 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MMS22LQ6ZRQ5 1243 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ERN2Q76MJ5 926 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ARCQ7LC44 396 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 HDXQ7Z353 690 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 TMEM110Q86TL2 294 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ZDHHC17Q8IUH5 632 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 GALNT12Q8IXK2 581 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CNPY4Q8N129 248 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC38A9Q8NBW4 561 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 C1orf131Q8NDD1 294 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC2A14Q8TDB8 520 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC35F5Q8WV83 523 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF606Q8WXB4 792 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 LINC00476Q8WZB0 136 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 RPL10LQ96L21 214 aaKnown RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 KREMEN1Q96MU8 473 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 PANX2Q96RD6 677 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MYCBPQ99417 103 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 BAG1Q99933 345 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 CRACR2AQ9BSW2 395 aa3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 MLPHQ9BV36 600 aaPredicted RBP3.03□□□□□ -1.92
SCARNA13-201ENST00000516672 SDCBP2Q9H190 292 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms