RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 SERPINH1P50454 418 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASCL1P50553 236 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TOB1P50616 345 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SUOXP51687 545 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLCNKAP51800 687 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF134P52741 427 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ART1P52961 327 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADPRHP54922 357 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HADHBP55084 474 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 F2RL1P55085 397 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTTPP55157 894 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADARP55265 1226 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 UCP2P55851 309 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM3BP58499 235 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAS2R40P59535 323 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TAS2R50P59544 299 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LILRA4P59901 499 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACTR3P61158 418 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSTP61278 116 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RPS8P62241 208 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADAM8P78325 824 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM189BP81408 668 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSBP2P81877 361 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS34P82930 218 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZXDBP98169 803 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 B4GALNT1Q00973 533 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ROR2Q01974 943 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SP2Q02086 613 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNFRSF17Q02223 184 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CEBPZQ03701 1054 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RELQ04864 619 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC34A1Q06495 639 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CXCL9Q07325 125 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPAG1Q07617 926 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP1Q07960 439 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC20A2Q08357 652 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACSM1Q08AH1 577 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACSM2AQ08AH3 577 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC15Q0P6D6 951 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSPA14Q0VDF9 509 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TROAPQ12815 778 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 OVGP1Q12889 678 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSPB3Q12988 150 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL24Q13007 206 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPP2Q13103 211 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTAPQ13126 283 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLD1Q13393 1074 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TNK1Q13470 666 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 BFSP2Q13515 415 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RAPSNQ13702 412 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DDX39BQ13838 428 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PDE7AQ13946 482 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL18Q14116 193 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DOC2AQ14183 400 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GALNT3Q14435 633 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FGFBP1Q14512 234 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT33BQ14525 404 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SQLEQ14534 574 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL13RA2Q14627 380 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NFATC4Q14934 902 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NR1D2Q14995 579 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP19Q14CB8 494 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 VEPH1Q14D04 833 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 EFTUD2Q15029 972 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC39A14Q15043 492 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RRS1Q15050 365 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR43Q15061 677 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNPS1Q15287 305 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RBBP5Q15291 538 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RCN1Q15293 331 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAPK11Q15759 364 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 STXBP2Q15833 593 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSX2Q16385 188 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RPE65Q16518 533 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 HADHQ16836 314 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TXNRD1Q16881 649 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TPD52L1Q16890 204 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IZUMO4Q1ZYL8 232 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCTN1Q2MV58 587 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIF19Q2TAC6 998 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 VWC2Q2TAL6 325 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASTE1Q2TB18 679 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AP5B1Q2VPB7 878 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRTGQ2VWP7 1150 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PTCHD3Q3KNS1 767 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 USP41Q3LFD5 358 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZIK1Q3SY52 487 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT71Q3SY84 523 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LEXMQ3ZCV2 418 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC36A3Q495N2 470 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD300EQ496F6 205 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLK5Q496M5 336 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NADK2Q4G0N4 442 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC152Q4G0S7 254 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCTD21Q4G0X4 260 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GXYLT1Q4G148 440 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AASDHQ4L235 1098 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCAF6Q58WW2 860 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SGO1Q5FBB7 561 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXO48Q5FWF7 155 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms