RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 CHRAC1Q9NRG0 131 aa17.14■□□□□ 0.33
SFXN1-212ENST00000515791 TREX1Q9NSU2 369 aa17.14■□□□□ 0.33
SFXN1-212ENST00000515791 ZKSCAN5Q9Y2L8 839 aa17.14■□□□□ 0.33
SFXN1-212ENST00000515791 ASH1LQ9NR48 2969 aaKnown RBP17.14■□□□□ 0.33
SFXN1-212ENST00000515791 UBR5O95071 2799 aaPredicted RBP17.13■□□□□ 0.33
SFXN1-212ENST00000515791 C21orf140B9A014 251 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 H3BMH7 237 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 CREG1O75629 220 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 SCRG1O75711 98 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 FGGP02679 453 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 FTH1P02794 183 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 CDH3P22223 829 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 CCR7P32248 378 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 KCNJ1P48048 391 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 GABRA4P48169 554 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 ARL4DP49703 201 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 ERV3-1Q14264 604 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 BRD3Q15059 726 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 LCN10Q6JVE6 187 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 OR1L3Q8NH93 324 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 APOBEC4Q8WW27 367 aaKnown RBP17.13■□□□□ 0.33
SFXN1-212ENST00000515791 MENTQ9BUN1 341 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 FAM117AQ9C073 453 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 ACTR10Q9NZ32 417 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 MARCH4Q9P2E8 410 aaPredicted RBP17.13■□□□□ 0.33
SFXN1-212ENST00000515791 KCND3Q9UK17 655 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
SFXN1-212ENST00000515791 GSAPA4D1B5 854 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 E7EVH7 732 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 CPNE3O75131 537 aaKnown RBP17.12■□□□□ 0.33
SFXN1-212ENST00000515791 GPC4O75487 556 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 OR56A5P0C7T3 313 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 PVRP15151 417 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 RORAP35398 523 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 LMAN1P49257 510 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 PCID2Q5JVF3 399 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 PLEKHS1Q5SXH7 462 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 TMTC4Q5T4D3 741 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 PRICKLE2Q7Z3G6 844 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 LDB1Q86U70 411 aaPredicted RBP17.12■□□□□ 0.33
SFXN1-212ENST00000515791 VRK3Q8IV63 474 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 TBC1D21Q8IYX1 336 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 PRELID2Q8N945 189 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 TRIM58Q8NG06 486 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 OR5K2Q8NHB8 316 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 ABHD17AQ96GS6 310 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 OR2A14Q96R47 310 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 AP1M1Q9BXS5 423 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 ACTL8Q9H568 366 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 SOHLH2Q9NX45 425 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 SPHK1Q9NYA1 384 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 RELNP78509 3460 aa17.12■□□□□ 0.33
SFXN1-212ENST00000515791 SPTBP11277 2137 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 TCRBV7S3A2A0A539 114 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 IQCF5A8MTL0 148 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 C2orf74A8MZ97 194 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 HCRTR1O43613 425 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 KATNA1O75449 491 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 GAS8O95995 478 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 CAPN1P07384 714 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 ARNTP27540 789 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 PEBP1P30086 187 aaKnown RBP17.11■□□□□ 0.33
SFXN1-212ENST00000515791 CXCR5P32302 372 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 RPS18P62269 152 aaKnown RBP17.11■□□□□ 0.33
SFXN1-212ENST00000515791 CRADDP78560 199 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 PLOD1Q02809 727 aaPredicted RBP17.11■□□□□ 0.33
SFXN1-212ENST00000515791 GRB7Q14451 532 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 ZIC1Q15915 447 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 ZNF449Q6P9G9 518 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 SPESP1Q6UW49 350 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 SLC22A15Q8IZD6 547 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 OR6P1Q8NGX9 317 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 GPR87Q9BY21 358 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 KLHL25Q9H0H3 589 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 P2RY12Q9H244 342 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 SYTL2Q9HCH5 934 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 FAM60AQ9NP50 221 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 ASF1AQ9Y294 204 aa17.11■□□□□ 0.33
SFXN1-212ENST00000515791 MYO18BQ8IUG5 2567 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 K7EM74 188 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 CHRM5P08912 532 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 NMBRP28336 390 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PTPN4P29074 926 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 SESN2P58004 480 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PRAMEP78395 509 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 ZNF385CQ66K41 422 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 C4orf22Q6V702 233 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PTRH1Q86Y79 214 aaKnown RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 TMEM126BQ8IUX1 230 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PPHLN1Q8NEY8 458 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms