RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 C3orf30Q96M34 536 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 NTMT1Q9BV86 223 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 TUBB1Q9H4B7 451 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 GULP1Q9UBP9 304 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 G3BP2Q9UN86 482 aaKnown RBP19.66■□□□□ 0.74
TRIO-223ENST00000515710 TMEM98Q9Y2Y6 226 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 TIMM22Q9Y584 194 aa19.66■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3DA0A087WVF3 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3IA0A087WXS9 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3EA0A087X179 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3KA0A087X1G2 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3FA6NER0 549 aaPredicted RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 MGAT4DA6NG13 374 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3LB9A6J9 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3HP0C7X1 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 THRAP10827 490 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 PIK3R1P27986 724 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 GDF5P43026 501 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 IRX1P78414 480 aaPredicted RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 INPP5AQ14642 412 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 IRF4Q15306 451 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3GQ6DHY5 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3CQ6IPX1 549 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 MBOAT1Q6ZNC8 495 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 TBC1D3Q8IZP1 549 aaPredicted RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 LILRA3Q8N6C8 439 aaPredicted RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 OR4F6Q8NGB9 312 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 MRGPRX1Q96LB2 322 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 CCDC138Q96M89 665 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 DPEP2Q9H4A9 486 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 WDR26Q9H7D7 661 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 AKTIPQ9H8T0 292 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 PHPT1Q9NRX4 125 aaPredicted RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 ST14Q9Y5Y6 855 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 COPG1Q9Y678 874 aaKnown RBP19.65■□□□□ 0.74
TRIO-223ENST00000515710 C5orf42Q9H799 3197 aa19.65■□□□□ 0.74
TRIO-223ENST00000515710 KRT16P08779 473 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 EBLN1P0CF75 366 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 COX4I1P13073 169 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 CPA2P48052 419 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 SLC6A12P48065 614 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 ATP4BP51164 291 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 TRAF3Q13114 568 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 LETMD1Q6P1Q0 360 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 LRRTM4Q86VH4 590 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 CDYL2Q8N8U2 506 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 FBXO15Q8NCQ5 510 aaPredicted RBP19.64■□□□□ 0.74
TRIO-223ENST00000515710 CFAP61Q8NHU2 1237 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 RP9Q8TA86 221 aaKnown RBP19.64■□□□□ 0.74
TRIO-223ENST00000515710 METTL6Q8TCB7 284 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 ATL1Q8WXF7 558 aa19.64■□□□□ 0.74
TRIO-223ENST00000515710 CDX2Q99626 313 aaPredicted RBP19.64■□□□□ 0.74
TRIO-223ENST00000515710 TNRC18O15417 2968 aaPredicted RBP19.64■□□□□ 0.74
TRIO-223ENST00000515710 KLHL33A6NCF5 533 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 GSC2O15499 205 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 RASSF9O75901 435 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 HGFP14210 728 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 EZRP15311 586 aaKnown RBP19.64■□□□□ 0.73
TRIO-223ENST00000515710 PDHA2P29803 388 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 ARL1P40616 181 aaPredicted RBP19.64■□□□□ 0.73
TRIO-223ENST00000515710 RPA4Q13156 261 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 SQLEQ14534 574 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 HERC3Q15034 1050 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 CRTC3Q6UUV7 619 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 TMEM92Q6UXU6 159 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 C11orf96Q7Z7L8 435 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 LONP2Q86WA8 852 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 KLK6Q92876 244 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 LGR4Q9BXB1 951 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 OSBPL6Q9BZF3 934 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 TRPS1Q9UHF7 1281 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 BTRCQ9Y297 605 aa19.64■□□□□ 0.73
TRIO-223ENST00000515710 ATP6AP2A0A1C7CYW4 349 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 PRR23AA6NEV1 266 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 ARHGEF33A8MVX0 844 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 ATP6AP2O75787 350 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 CAPN1P07384 714 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 LINC00032P0C843 101 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 LBPP18428 481 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 DNAL1Q4LDG9 190 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 DOK6Q6PKX4 331 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 TUBGCP3Q96CW5 907 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 CDK15Q96Q40 435 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 MIPEPQ99797 713 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 RIC8BQ9NVN3 520 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 HMOX2P30519 316 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 ELF3P78545 371 aaPredicted RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 MLLT1Q03111 559 aaPredicted RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 XKR7Q5GH72 579 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 PTCRAQ6ISU1 281 aaPredicted RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 KIAA1324Q6UXG2 1013 aaKnown RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 RNF165Q6ZSG1 346 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 AMZ2Q86W34 360 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 KLHDC8AQ8IYD2 350 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 RBM15BQ8NDT2 890 aaKnown RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 UTP4Q969X6 686 aaKnown RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 CADM1Q9BY67 442 aaKnown RBP19.63■□□□□ 0.73
TRIO-223ENST00000515710 POLG2Q9UHN1 485 aa19.63■□□□□ 0.73
TRIO-223ENST00000515710 LOC100653049A0A140TA62 436 aa19.62■□□□□ 0.73
TRIO-223ENST00000515710 KMOO15229 486 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms