RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ABRQ12979 859 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 SYTL3Q4VX76 610 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 ZNF789Q5FWF6 425 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 SPESP1Q6UW49 350 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 C4orf22Q6V702 233 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 ZNF517Q6ZMY9 492 aaPredicted RBP10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 AMIGO1Q86WK6 493 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 TMEM126BQ8IUX1 230 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 LRRC8AQ8IWT6 810 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 PPHLN1Q8NEY8 458 aaKnown RBP10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 TRIM58Q8NG06 486 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 OR4L1Q8NH43 312 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 OR5K2Q8NHB8 316 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 MAIP1Q8WWC4 291 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 TRAPPC9Q96Q05 1148 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 ACTL8Q9H568 366 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 XKR8Q9H6D3 395 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 FANCEQ9HB96 536 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 SYTL2Q9HCH5 934 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 DRG1Q9Y295 367 aaKnown RBP10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 KCNMB2Q9Y691 235 aa10.14□□□□□ -0.79
HMGXB3-205ENST00000514469 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 F8W8V4 182 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 PYCARD-AS1I3L0S3 204 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 KATNA1O75449 491 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 TPBGLP0DKB5 382 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 CCR7P32248 378 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 SHMT2P34897 504 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 RORAP35398 523 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 PRAMEP78395 509 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 BASP1P80723 227 aaKnown RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 GPS2Q13227 327 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 PRKG2Q13237 762 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 ERV3-1Q14264 604 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 BRD3Q15059 726 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 FASTKD1Q53R41 847 aaKnown RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 AARS2Q5JTZ9 985 aaKnown RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 PCID2Q5JVF3 399 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 IZUMO3Q5VZ72 239 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 NAPRTQ6XQN6 538 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 ATG14Q6ZNE5 492 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 TBC1D21Q8IYX1 336 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 SLC22A15Q8IZD6 547 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 SLC38A9Q8NBW4 561 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 OR6P1Q8NGX9 317 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 OR1L3Q8NH93 324 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 FLVCR1-AS1Q8TAF5 88 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 C9orf43Q8TAL5 461 aaPredicted RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 LKAAEAR1Q8TD35 194 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 SEC14L1Q92503 715 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 CPT1BQ92523 772 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 TTC1Q99614 292 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 GPR87Q9BY21 358 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 IL22Q9GZX6 179 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 CHRAC1Q9NRG0 131 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 TREX1Q9NSU2 369 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 CATSPERZQ9NTU4 200 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 ACTR10Q9NZ32 417 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 POLG2Q9UHN1 485 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 CDYLQ9Y232 598 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 POLHQ9Y253 713 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 ASF1AQ9Y294 204 aa10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 TLN1Q9Y490 2541 aaKnown RBP10.13□□□□□ -0.79
HMGXB3-205ENST00000514469 PIPSLA2A3N6 862 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 CDC14CA4D256 554 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 TMEM150CB9EJG8 249 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 AP3B1O00203 1094 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 CHRM5P08912 532 aaPredicted RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PVRP15151 417 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 UGT2B7P16662 529 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 TPSB2P20231 275 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PTPN4P29074 926 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PPARGP37231 505 aaPredicted RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 KCNJ1P48048 391 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PMS2P54278 862 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 SESN2P58004 480 aaPredicted RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 RPS18P62269 152 aaKnown RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 CRADDP78560 199 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 TPSAB1Q15661 275 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 UGT8Q16880 541 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 DNAJC21Q5F1R6 531 aaKnown RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 PRAMEF17Q5VTA0 474 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 UNC5AQ6ZN44 842 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 CDHR3Q6ZTQ4 885 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 SYVN1Q86TM6 617 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 TMEM135Q86UB9 458 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 VRK3Q8IV63 474 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 DSELQ8IZU8 1212 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 C19orf47Q8N9M1 422 aaKnown RBP10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 ABHD17AQ96GS6 310 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 OR2A14Q96R47 310 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 CARD6Q9BX69 1037 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 TSSK1BQ9BXA7 367 aa10.12□□□□□ -0.79
HMGXB3-205ENST00000514469 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms