RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OMDQ99983 421 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 C1orf50Q9BV19 199 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 FUNDC2Q9BWH2 189 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SHCBP1LQ9BZQ2 653 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CRISPLD1Q9H336 500 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PCDHGB7Q9Y5F8 929 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 HEATR9A2RTY3 570 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ANKRD34BA5PLL1 514 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PRPSAP2O60256 369 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 OCM2P0CE71 109 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 OCMP0CE72 109 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 MTHFD1P11586 935 aaKnown RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 IGFBP6P24592 240 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PSMB4P28070 264 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PIGAP37287 484 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ALDH3A2P51648 485 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 C21orf59P57076 290 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CXCR4P61073 352 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SF3B4Q15427 424 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 DDR2Q16832 855 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SLC25A52Q3SY17 297 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PPP6R3Q5H9R7 873 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 BTN2A1Q7KYR7 527 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 DSG4Q86SJ6 1040 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 MSRB3Q8IXL7 192 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PYROXD2Q8N2H3 581 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 OR6F1Q8NGZ6 308 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SUN5Q8TC36 379 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 APH1BQ8WW43 257 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 MRPL57Q9BQC6 102 aaKnown RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 LPIN3Q9BQK8 851 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CCDC68Q9H2F9 335 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PARVBQ9HBI1 364 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF334Q9HCZ1 680 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 TDP1Q9NUW8 608 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SMPD3Q9NY59 655 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 BCAP29Q9UHQ4 241 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CDYLQ9Y232 598 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PCDHB3Q9Y5E6 796 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 DNAJC15Q9Y5T4 150 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ISPDA4D126 451 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ARHGAP42A6NI28 874 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CLDN24A6NM45 220 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 DSCR3O14972 297 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 NCAM2O15394 837 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 HOXC11O43248 304 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SNAP29O95721 258 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CEBPBP17676 345 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 IMPDH1P20839 514 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 GGT5P36269 586 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 GARSP41250 739 aaKnown RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 NPY2RP49146 381 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 DLX2Q07687 328 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SLC12A1Q13621 1099 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 TEAD2Q15562 447 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF77Q15935 545 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 PARP15Q460N3 678 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 MPP7Q5T2T1 576 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 TUBA3EQ6PEY2 450 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 CLVS1Q8IUQ0 354 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-205ENST00000514271 GJD3Q8N144 294 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 RHOXF1Q8NHV9 184 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 ZFP90Q8TF47 636 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 LGMNQ99538 433 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 NUF2Q9BZD4 464 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 SIAEQ9HAT2 523 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 POPDC3Q9HBV1 291 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 OAZ3Q9UMX2 235 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
CLIP1-205ENST00000514271 A0A087X1B8 175 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 TYW5A2RUC4 315 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FAM72CH0Y354 149 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 PFDN6O15212 129 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 NRP2O60462 931 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SNRPB2P08579 225 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 GOT1P17174 413 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 NMBRP28336 390 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SERPINB6P35237 376 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 EEFSECP57772 596 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ADIGQ0VDE8 80 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 LRRC32Q14392 662 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FAM72AQ5TYM5 149 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FAM72DQ6L9T8 149 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 PRMT9Q6P2P2 845 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 KDELC1Q6UW63 502 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SEZ6L2Q6UXD5 910 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 RANBP10Q6VN20 620 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 GAREM2Q75VX8 874 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SNX20Q7Z614 316 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ISCA2Q86U28 154 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 RALGPS2Q86X27 583 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FAM72BQ86X60 149 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 MMAAQ8IVH4 418 aaKnown RBP7.27□□□□□ -1.25
CLIP1-205ENST00000514271 SNX31Q8N9S9 440 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 CEP70Q8NHQ1 597 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 ATL1Q8WXF7 558 aa7.27□□□□□ -1.25
CLIP1-205ENST00000514271 FGF11Q92914 225 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms