RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CASP5P51878 434 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 HK3P52790 923 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 LIMK2P53671 638 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PER3P56645 1201 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 TBX4P57082 545 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 RAP2BP61225 183 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 RPS24P62847 133 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC20A2Q08357 652 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 BIRC3Q13489 604 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 C1orf61Q13536 156 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 ARHGEF7Q14155 803 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 KRT81Q14533 505 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 C16orf72Q14CZ0 275 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 INPP5JQ15735 1006 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 EDRF1Q3B7T1 1238 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 ARHGAP17Q68EM7 881 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 OR6B2Q6IFH4 312 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CXorf57Q6NSI4 855 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 MACC1Q6ZN28 852 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 BEND5Q7L4P6 421 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 MCEMP1Q8IX19 187 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 C12orf56Q8IXR9 622 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC65Q8IXS2 484 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 RASSF8Q8NHQ8 419 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 ADAMTS15Q8TE58 950 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PARD3BQ8TEW8 1205 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 JPH3Q8WXH2 748 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 IRGQQ8WZA9 623 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 JAKMIP2Q96AA8 810 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 ARHGEF26Q96DR7 871 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 FBXL20Q96IG2 436 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 MYOCQ99972 504 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 C7orf25Q9BPX7 421 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 FEM1AQ9BSK4 669 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 LRRC61Q9BV99 259 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 LRRC4Q9HBW1 653 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 FZD3Q9NPG1 666 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CNGB3Q9NQW8 809 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 FBXO8Q9NRD0 319 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PANK4Q9NVE7 773 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC39A1Q9NY26 324 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 ELOVL5Q9NYP7 299 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PDP2Q9P2J9 529 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC25A13Q9UJS0 675 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 KIAA1257Q9ULG3 409 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 GPR34Q9UPC5 381 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 HS3ST2Q9Y278 367 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 TMEM184BQ9Y519 407 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC168Q8NDH2 2452 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 POLEQ07864 2286 aa3.65□□□□□ -1.82
PDLIM5-218ENST00000513341 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 IGHV5-10-1A0A0J9YXX1 117 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 LOC101059948A0A1B0GTJ6 334 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA6CA6NDK9 693 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA6BA6NDN3 693 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 YJEFN3A6XGL0 299 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 E7ENQ6 273 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 K7EM74 188 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 XPO1O14980 1071 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 RAD51BO15315 384 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TEX33O43247 280 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TGFB1I1O43294 461 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SGTAO43765 313 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 DUX1O43812 170 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 DPM1O60762 260 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 PRSS23O95084 383 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 VNN1O95497 513 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TNFP01375 233 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA6DP0CG33 693 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 MT3P25713 68 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 HTR1BP28222 390 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 HOXD13P35453 343 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 STK19P49842 368 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 NEK3P51956 506 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 METAP1P53582 386 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 PMS2P54278 862 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 KRT83P78385 493 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 B4GALNT1Q00973 533 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 MC2RQ01718 297 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ENPEPQ07075 957 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SEMA5AQ13591 1074 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 PEX6Q13608 980 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GTF2H3Q13889 308 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 HLTFQ14527 1009 aaKnown RBP eCLIP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ODF1Q14990 250 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 NR1D2Q14995 579 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 NOMO1Q15155 1222 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ZACNQ401N2 412 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 FAM153CQ494X1 144 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 C14orf28Q4W4Y0 310 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 THEMIS2Q5TEJ8 643 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CCDC181Q5TID7 509 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 RRAGBQ5VZM2 374 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SEL1L3Q68CR1 1132 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 NXNQ6DKJ4 435 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CEACAM20Q6UY09 585 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CCDC73Q6ZRK6 1079 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 MMS22LQ6ZRQ5 1243 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TMPRSS9Q7Z410 1059 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 KDELC2Q7Z4H8 507 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms