RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PAPSS2O95340 614 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 ALPLP05186 524 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ICAM1P05362 532 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 TPOP07202 933 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ASNSP08243 561 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 POLR2CP19387 275 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 CAPZA2P47755 286 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 FASLGP48023 281 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 TDO2P48775 406 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 EEF1A1P68104 462 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 PLA2G7Q13093 441 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 FHL1Q13642 323 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 OASLQ15646 514 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 IZUMO4Q1ZYL8 232 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 SOWAHCQ53LP3 525 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 RARS2Q5T160 578 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 EEF1A1P5Q5VTE0 462 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 PMS2CLQ68D20 193 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 RHBDF2Q6PJF5 856 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 PGBD5Q8N414 524 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 RDM1Q8NG50 284 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 EXOC6Q8TAG9 804 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 TANKQ92844 425 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 TAAR8Q969N4 342 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 MIB2Q96AX9 1013 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ZBTB9Q96C00 473 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 PHF21BQ96EK2 531 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 DYNLL2Q96FJ2 89 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ZNF385AQ96PM9 386 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 PAFAH2Q99487 392 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 PARK7Q99497 189 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 FSD1Q9BTV5 496 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 HIPK2Q9H2X6 1198 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 SEBOXQ9HB31 216 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 PDE7BQ9NP56 450 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 LTB4R2Q9NPC1 389 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ZNF224Q9NZL3 707 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ACSL5Q9ULC5 683 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 MAGED1Q9Y5V3 778 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 FLT1P17948 1338 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 PDS5AQ29RF7 1337 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 SCN9AQ15858 1988 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 ZNF609O15014 1411 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 TTC3P53804 2025 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 A0A0G2JPF8 293 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 hCG_1809904A0A1W2PP81 198 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 A0A1W2PPE2 198 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 A0A1W2PR64 198 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 HNRNPCL3B7ZW38 293 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 C19orf81C9J6K1 198 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 RFPL2O75678 378 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 GJB3O75712 270 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 RSL1D1O76021 490 aaKnown RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 KCNK5O95279 499 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 NGFRP08138 427 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 HNRNPCL4P0DMR1 293 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 MMP9P14780 707 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 ACSL1P33121 698 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 USP8P40818 1118 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 HTR6P50406 440 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 BACE1P56817 501 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 CD81P60033 236 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 SEC61A1P61619 476 aaKnown RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 SNRPEP62304 92 aaKnown RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 TUBA1BP68363 451 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PPP2R2BQ00005 443 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PLIN5Q00G26 463 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 LTBQ06643 244 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 SF3B4Q15427 424 aaKnown RBP eCLIP4.12□□□□□ -1.75
HTT-210ENST00000512909 SHROOM1Q2M3G4 852 aaPredicted RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 TRNP1Q6NT89 227 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 CFAP77Q6ZQR2 320 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PLEKHM3Q6ZWE6 761 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PRPF39Q86UA1 669 aaKnown RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 GLCCI1Q86VQ1 547 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 CLIP4Q8N3C7 705 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 THAP6Q8TBB0 222 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PTERQ96BW5 349 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 GRAMD2BQ96HH9 432 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 CEP295NLQ96MC4 621 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 DUX5Q96PT3 197 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 NACAP1Q9BZK3 213 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 KLHL4Q9C0H6 718 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 LRMDAQ9H2I8 198 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 C6orf106Q9H6K1 298 aaPredicted RBP4.12□□□□□ -1.75
HTT-210ENST00000512909 PCDH9Q9HC56 1237 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 MMP25Q9NPA2 562 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 ANKEF1Q9NU02 776 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 MTMR10Q9NXD2 777 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 TAS2R14Q9NYV8 317 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 PADI1Q9ULC6 663 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 AGTPBP1Q9UPW5 1226 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 MYH3P11055 1940 aa4.12□□□□□ -1.75
HTT-210ENST00000512909 SSC5DA1L4H1 1573 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 CACNA1FO60840 1977 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 SAA2-SAA4A0A096LPE2 208 aa4.11□□□□□ -1.75
HTT-210ENST00000512909 IGLV5-52A0A0A0MRZ9 124 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms