RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 C2orf81A6NN90 581 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 HACD1B0YJ81 288 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 C21orf140B9A014 251 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 STX7O15400 261 aaKnown RBP7.02□□□□□ -1.29
USP46-208ENST00000512656 KIF1CO43896 1103 aaKnown RBP7.02□□□□□ -1.29
USP46-208ENST00000512656 CST8O60676 142 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SPAG6O75602 509 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 RFPL1O75677 317 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 POP7O75817 140 aaKnown RBP7.02□□□□□ -1.29
USP46-208ENST00000512656 ANXA9O76027 345 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP46-208ENST00000512656 MSH3P20585 1137 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 AKT1P31749 480 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 CDKN2BP42772 138 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 LEPRP48357 1165 aaKnown RBP7.02□□□□□ -1.29
USP46-208ENST00000512656 PDE1BQ01064 536 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ACY1Q03154 408 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 MPP3Q13368 585 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TUBB3Q13509 450 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 DNASE1L3Q13609 305 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 PLCL1Q15111 1095 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TCEAL1Q15170 157 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TAZQ16635 292 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 LONRF2Q1L5Z9 754 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TFDP3Q5H9I0 405 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SIRPB2Q5JXA9 342 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 COLEC12Q5KU26 742 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TMTC4Q5T4D3 741 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 KAZNQ674X7 775 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TCTN3Q6NUS6 607 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TMEM220Q6QAJ8 160 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 MFSD7Q6UXD7 560 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 FAM92BQ6ZTR7 304 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 PID1Q7Z2X4 250 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 C11orf96Q7Z7L8 435 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 KMT5CQ86Y97 462 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 CNGA4Q8IV77 575 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 RCOR2Q8IZ40 523 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 CARFQ8N187 725 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TTC30BQ8N4P2 665 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SLC25A41Q8N5S1 370 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TEX19Q8NA77 164 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 DDHD1Q8NEL9 900 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 OR8K5Q8NH50 307 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 BLOC1S5Q8TDH9 187 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ZFPM2Q8WW38 1151 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 RSC1A1Q92681 617 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ELMO2Q96JJ3 720 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 FCRL5Q96RD9 977 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 FSD1LQ9BXM9 530 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TWSG1Q9GZX9 223 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 IL26Q9NPH9 171 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ABHD10Q9NUJ1 306 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SMOXQ9NWM0 555 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 UBP1Q9NZI7 540 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 IL17CQ9P0M4 197 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SEMA5BQ9P283 1151 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 TRIM10Q9UDY6 481 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 ACSL5Q9ULC5 683 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 MAN2B2Q9Y2E5 1009 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP46-208ENST00000512656 UBA6A0AVT1 1052 aaPredicted RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 MGAT4DA6NG13 374 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 TLCD2A6NGC4 264 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 AURKAO14965 403 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A9O60656 530 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 MFAP3LO75121 409 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 CREG1O75629 220 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ZNF189O75820 626 aaPredicted RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 RALBP11234 206 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ZNF28P17035 718 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A6P19224 532 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 COMTP21964 271 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 FUT4P22083 530 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A1P22309 533 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 UGT1A4P22310 534 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 F8A1P23610 371 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 NDUFS1P28331 727 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 MAPK1P28482 360 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 PMS2P54278 862 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 GEMP55040 296 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 HADHBP55084 474 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 RPS15P62841 145 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 HSD11B2P80365 405 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 WASHC5Q12768 1159 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 PRKAA1Q13131 559 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 XRCC4Q13426 336 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 ERV3-1Q14264 604 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 KRT33BQ14525 404 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 SLC1A5Q15758 541 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 CHRNA6Q15825 494 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 RPE65Q16518 533 aa7.01□□□□□ -1.29
USP46-208ENST00000512656 SKOR2Q2VWA4 1001 aaPredicted RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 KHDC1Q4VXA5 237 aaKnown RBP7.01□□□□□ -1.29
USP46-208ENST00000512656 DNTTIP2Q5QJE6 756 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms