RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TP73O15350 636 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 GPC4O75487 556 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 ANKRD34CP0C6C1 535 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 TPBGLP0DKB5 382 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 TSPAN7P41732 249 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 ELK3P41970 407 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 ABCG1P45844 678 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 KPNA2P52292 529 aaKnown RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 MC2RQ01718 297 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 TLE3Q04726 772 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 FOXM1Q08050 763 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 CLN3Q13286 438 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 KCNAB1Q14722 419 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 CRYMQ14894 314 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 HIF1AQ16665 826 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 TMEM164Q5U3C3 297 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 OTOAQ7RTW8 1153 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 ANKMY2Q8IV38 441 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 SKA2Q8WVK7 121 aaPredicted RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 ELMO2Q96JJ3 720 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 PANX3Q96QZ0 392 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 WDR83Q9BRX9 315 aaKnown RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 RAB33BQ9H082 229 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 ZNF768Q9H5H4 540 aaKnown RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 SLC17A6Q9P2U8 582 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 RALYQ9UKM9 306 aaKnown RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 FBXO5Q9UKT4 447 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 ICKQ9UPZ9 632 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 FAM187AA6NFU0 413 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 SLCO2B1O94956 709 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 ESR1P03372 595 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 PKMP14618 531 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 CHRM3P20309 590 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 ARL4CP56559 192 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 PLOD1Q02809 727 aaPredicted RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 PRKAA1Q13131 559 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 SRSF6Q13247 344 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 SPANXN3Q5MJ09 141 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 DCAF12Q5T6F0 453 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 ZNF549Q6P9A3 640 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 CNSTQ6PJW8 725 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 KCNMB4Q86W47 210 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 AMIGO1Q86WK6 493 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 TBC1D21Q8IYX1 336 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 LMNTD1Q8N9Z9 388 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 GSDMBQ8TAX9 411 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 KLHL6Q8WZ60 621 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 FAM167BQ9BTA0 163 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 DDA1Q9BW61 102 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 TFB2MQ9H5Q4 396 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 PLAC1Q9HBJ0 212 aa13.57□□□□□ -0.24
DDX41-212ENST00000511040 INTS10Q9NVR2 710 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 SIDT1Q9NXL6 827 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 ZC3H7BQ9UGR2 993 aaKnown RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
DDX41-212ENST00000511040 ADAMTS20P59510 1910 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 CELSR3Q9NYQ7 3312 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 TLCD2A6NGC4 264 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 H3BMM5 538 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 TOX3O15405 576 aaPredicted RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 TTC4O95801 387 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 EBLN1P0CF75 366 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 BDKRB1P46663 353 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 ARL4DP49703 201 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 RAB15P59190 212 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 TRMT10BQ6PF06 316 aaKnown RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 UNC5AQ6ZN44 842 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 VASH2Q86V25 355 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 ADGRF3Q8IZF5 1079 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 C2orf73Q8N5S3 287 aaPredicted RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 ZBTB2Q8N680 514 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 OR5K2Q8NHB8 316 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 CALML6Q8TD86 181 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 UBXN4Q92575 508 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 OR6C1Q96RD1 312 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 ERP44Q9BS26 406 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 DPH1Q9BZG8 443 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 KLHL25Q9H0H3 589 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 PPANQ9NQ55 473 aaKnown RBP13.56□□□□□ -0.24
DDX41-212ENST00000511040 FBXO8Q9NRD0 319 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 ACTR10Q9NZ32 417 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 ACSL6Q9UKU0 697 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 LHX6Q9UPM6 363 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
DDX41-212ENST00000511040 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 E5RI56 91 aa13.55□□□□□ -0.24
DDX41-212ENST00000511040 SMAPO00193 183 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms