RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 FOCADQ5VW36 1801 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 H3BN98 237 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 IDH3BO43837 385 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 PRAMEF1O95521 474 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CYBRD1Q53TN4 286 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 PDE12Q6L8Q7 609 aaKnown RBP14.63□□□□□ -0.07
USP38-202ENST00000510377 TBPL2Q6SJ96 375 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 TTC30BQ8N4P2 665 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 CD99L2Q8TCZ2 262 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 SGCDQ92629 289 aa14.63□□□□□ -0.07
USP38-202ENST00000510377 A8MU76 341 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 PGRP06401 933 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ALPIP09923 528 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 MAGEA8P43361 318 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 YBEYP58557 167 aaPredicted RBP14.62□□□□□ -0.07
USP38-202ENST00000510377 BCL2L1Q07817 233 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 MAP2K5Q13163 448 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SELPLGQ14242 412 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 UBXN11Q5T124 520 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SMYD5Q6GMV2 418 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TMEM53Q6P2H8 277 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TMEM207Q6UWW9 146 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 GOLGA7Q7Z5G4 137 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DEFB128Q7Z7B8 93 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TRUB1Q8WWH5 349 aaKnown RBP14.62□□□□□ -0.07
USP38-202ENST00000510377 ACDQ96AP0 544 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 L3HYPDHQ96EM0 354 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TRIM39Q9HCM9 518 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SH3BP1Q9Y3L3 701 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SHROOM3Q8TF72 1996 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ARHGEF9O43307 516 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 UGT2B11O75310 529 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 CREG1O75629 220 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 STK16O75716 305 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 GLUD1P00367 558 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 FUCA1P04066 466 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 FDXRP22570 491 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 COPZ1P61923 177 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ZNF33AQ06730 810 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 PSAPL1Q6NUJ1 521 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SVOPLQ8N434 492 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DMRTB1Q96MA1 342 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ZNF599Q96NL3 588 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DEPDC7Q96QD5 511 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DERL2Q9GZP9 239 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 GJD2Q9UKL4 321 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TLR6Q9Y2C9 796 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 FCF1Q9Y324 198 aaKnown RBP14.62□□□□□ -0.07
USP38-202ENST00000510377 KIAA1217Q5T5P2 1943 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DYTNA2CJ06 578 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 EFCAB10A6NFE3 127 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 F2P00734 622 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 KIR3DL1P43629 444 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ILF2Q12905 390 aaKnown RBP14.62□□□□□ -0.07
USP38-202ENST00000510377 FAM110CQ1W6H9 321 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 KDELC1Q6UW63 502 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 TPGS1Q6ZTW0 290 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 SERPINA9Q86WD7 417 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 UBE2J2Q8N2K1 259 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 PCSK9Q8NBP7 692 aaKnown RBP14.62□□□□□ -0.07
USP38-202ENST00000510377 PSD4Q8NDX1 1056 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 DCSTAMPQ9H295 470 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 C1orf109Q9NX04 203 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 NUDT4Q9NZJ9 180 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 ZNF451Q9Y4E5 1061 aa14.62□□□□□ -0.07
USP38-202ENST00000510377 PER2O15055 1255 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 PAPSS2O95340 614 aaPredicted RBP14.61□□□□□ -0.07
USP38-202ENST00000510377 HTR1EP28566 365 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 SPCS2Q15005 226 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 KANK2Q63ZY3 851 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 Q6ZNX1 250 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 C11orf96Q7Z7L8 435 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 DPF3Q92784 378 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 ZNF347Q96SE7 839 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 COPS4Q9BT78 406 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 RPS6KA6Q9UK32 745 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 KRBA1A5PL33 1030 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 H0YAE9 185 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 TSC22D2O75157 780 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 ITGB1P05556 798 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 CKMP06732 381 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 SLC26A3P40879 764 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 CD97P48960 835 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 RPS14P62263 151 aaKnown RBP14.61□□□□□ -0.07
USP38-202ENST00000510377 SPIBQ01892 262 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 PLD1Q13393 1074 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 TAB1Q15750 504 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
USP38-202ENST00000510377 MAMDC4Q6UXC1 1216 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 AGMOQ6ZNB7 445 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 TICAM1Q8IUC6 712 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 NT5C3BQ969T7 300 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 GKN1Q9NS71 199 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 SAMD4AQ9UPU9 718 aaKnown RBP14.61□□□□□ -0.07
USP38-202ENST00000510377 WDR37Q9Y2I8 494 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 EEDO75530 441 aaKnown RBP14.61□□□□□ -0.07
USP38-202ENST00000510377 ALDH2P05091 517 aa14.61□□□□□ -0.07
USP38-202ENST00000510377 HTR7P34969 479 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms