RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TRAPPC9Q96Q05 1148 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 TTC1Q99614 292 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 SLC25A23Q9BV35 468 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 ING2Q9H160 280 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 ACTR10Q9NZ32 417 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 ASF1AQ9Y294 204 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 TDRKHQ9Y2W6 561 aaKnown RBP14.92□□□□□ -0.02
TPM3-219ENST00000509409 PRSS21Q9Y6M0 314 aa14.92□□□□□ -0.02
TPM3-219ENST00000509409 OR51F1A6NGY5 319 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 TTLL8A6PVC2 850 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 E7EQ34 232 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 QSOX1O00391 747 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 LIN7AO14910 233 aaPredicted RBP14.91□□□□□ -0.02
TPM3-219ENST00000509409 FTH1P02794 183 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 RAB40ALP0C0E4 278 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 PGDP52209 483 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 ITGA1P56199 1179 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 ABRQ12979 859 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 IL10RAQ13651 578 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 BOP1Q14137 746 aaKnown RBP14.91□□□□□ -0.02
TPM3-219ENST00000509409 ITIH4Q14624 930 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 SYTL3Q4VX76 610 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 CPZQ66K79 652 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 PPP1R21Q6ZMI0 780 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 GPR135Q8IZ08 494 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 ADGRF3Q8IZF5 1079 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 OR52K1Q8NGK4 314 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 OR5AR1Q8NGP9 310 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 DESI2Q9BSY9 194 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 NLNQ9BYT8 704 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 PCMTD2Q9NV79 361 aa14.91□□□□□ -0.02
TPM3-219ENST00000509409 ZNF106Q9H2Y7 1883 aaKnown RBP14.91□□□□□ -0.02
TPM3-219ENST00000509409 TCRBV7S2A1N4TA0A589 114 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 CCDC162PA2VCL2 907 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 MROH6A6NGR9 719 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 CYSRT1A8MQ03 144 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 E7EVH7 732 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 ZNF749O43361 778 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 IFNB1P01574 187 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 PDGFAP04085 211 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 HBQ1P09105 142 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 OR56A5P0C7T3 313 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 AGXTP21549 392 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 STIP1P31948 543 aaKnown RBP14.9□□□□□ -0.02
TPM3-219ENST00000509409 CDH17Q12864 832 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 KLF1Q13351 362 aaPredicted RBP14.9□□□□□ -0.02
TPM3-219ENST00000509409 LAMB3Q13751 1172 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 PTCHD3Q3KNS1 767 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 ZNF658BQ4V348 819 aaPredicted RBP14.9□□□□□ -0.02
TPM3-219ENST00000509409 LYPLAL1Q5VWZ2 237 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 SPESP1Q6UW49 350 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 NAPRTQ6XQN6 538 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 ZNF517Q6ZMY9 492 aaPredicted RBP14.9□□□□□ -0.02
TPM3-219ENST00000509409 UNC5AQ6ZN44 842 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 SYTL1Q8IYJ3 562 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 EFCAB3Q8N7B9 438 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 SLC35B2Q8TB61 432 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 HDAC10Q969S8 669 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 MIB2Q96AX9 1013 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 PITPNM3Q9BZ71 974 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 ETNK1Q9HBU6 452 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 ANKMY1Q9P2S6 941 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 IMPACTQ9P2X3 320 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 POLG2Q9UHN1 485 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 TCFL5Q9UL49 500 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 G3BP2Q9UN86 482 aaKnown RBP14.9□□□□□ -0.02
TPM3-219ENST00000509409 HECTD1Q9ULT8 2610 aa14.9□□□□□ -0.02
TPM3-219ENST00000509409 A0A0U1RQJ8 604 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 A6NL46 340 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 C9J4A7 227 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 F8W8V4 182 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 ZNF185O15231 689 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 SHMT2P34897 504 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 RORAP35398 523 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 FDFT1P37268 417 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 PTGIRP43119 386 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 CSE1LP55060 971 aaKnown RBP14.89□□□□□ -0.03
TPM3-219ENST00000509409 PLOD1Q02809 727 aaPredicted RBP14.89□□□□□ -0.03
TPM3-219ENST00000509409 SEL1L2Q5TEA6 688 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 FAM69BQ5VUD6 431 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 MLIPQ5VWP3 458 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 CDHR3Q6ZTQ4 885 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 TRIM73Q86UV7 250 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 TBC1D21Q8IYX1 336 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 SPC24Q8NBT2 197 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 OR6P1Q8NGX9 317 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 ATG4AQ8WYN0 398 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 IRAK4Q9NWZ3 460 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 GPN3Q9UHW5 284 aaPredicted RBP14.89□□□□□ -0.03
TPM3-219ENST00000509409 ICKQ9UPZ9 632 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 ZNF148Q9UQR1 794 aa14.89□□□□□ -0.03
TPM3-219ENST00000509409 UBR5O95071 2799 aaPredicted RBP14.89□□□□□ -0.03
TPM3-219ENST00000509409 HEATR9A2RTY3 570 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 ERI2A8K979 691 aaKnown RBP14.88□□□□□ -0.03
TPM3-219ENST00000509409 ISM1B1AKI9 464 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 KDM1AO60341 852 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 VPS4BO75351 444 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 TMEM63AO94886 807 aa14.88□□□□□ -0.03
TPM3-219ENST00000509409 GOT2P00505 430 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms