RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 HDHD2Q9H0R4 259 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MMP27Q9H306 513 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 LRRC19Q9H756 370 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 BARHL2Q9NY43 387 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 DNAJB11Q9UBS4 358 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 DNPEPQ9ULA0 475 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 KIAA1257Q9ULG3 409 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 SATB2Q9UPW6 733 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 MAB21L2Q9Y586 359 aa3.55□□□□□ -1.84
HMGB3P15-201ENST00000507326 CARMIL1Q5VZK9 1371 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 UBE4BO95155 1302 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 A0A087WZ62 844 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 C2orf92A0A1B0GVN3 265 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM149AA5PLN7 773 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZSCAN5BA6NJL1 495 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF716A6NP11 495 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 A8MUI8 341 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 BECN2A8MW95 431 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 KBTBD13C9JR72 458 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 H3BMM5 538 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PSMD11O00231 422 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 QSOX1O00391 747 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 POLR1CO15160 346 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PPM1DO15297 605 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 HBP1O60381 514 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PAGE4O60829 102 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 B4GALT2O60909 372 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF821O75541 412 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SURF6O75683 361 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 KLHL2O95198 593 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 LGI1O95970 557 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CSF1RP07333 972 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF735P0CB33 412 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 G6PDP11413 515 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 VPREB1P12018 145 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 RPA2P15927 270 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CYP2A7P20853 494 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MSR1P21757 451 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ACHEP22303 614 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 FMO4P31512 558 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CA8P35219 290 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRIM23P36406 574 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 VIPR2P41587 438 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 KCNJ4P48050 445 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 NUMBP49757 651 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MTHFSP49914 203 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 GATMP50440 423 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PSMD7P51665 324 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ATP12AP54707 1039 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ADARP55265 1226 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ARPC4P59998 168 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 RPL23AP62750 156 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 RBM6P78332 1123 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 IRX4P78413 519 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 OTUD4Q01804 1114 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SNTB2Q13425 540 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PDK4Q16654 411 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CDO1Q16878 200 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 FBXO43Q4G163 708 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC9B1Q4ZJI4 515 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TAF1BQ53T94 588 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SGO1Q5FBB7 561 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 AARS2Q5JTZ9 985 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SPANXN2Q5MJ10 180 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 RARS2Q5T160 578 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 DCST1Q5T197 706 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF618Q5T7W0 954 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TEDDM1Q5T9Z0 273 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 AWAT2Q6E213 333 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 DHRS7BQ6IAN0 325 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 JADE1Q6IE81 842 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR6B2Q6IFH4 312 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ANKRD16Q6P6B7 361 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TMEM81Q6P7N7 255 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZCCHC12Q6PEW1 402 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TSSK4Q6SA08 328 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRIM72Q6ZMU5 477 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TPGS1Q6ZTW0 290 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MRPL10Q7Z7H8 261 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CENPVQ7Z7K6 275 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 BIVMQ86UB2 503 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CNGA4Q8IV77 575 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SPARTQ8N0X7 666 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PYROXD2Q8N2H3 581 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM109AQ8N4B1 249 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CEP112Q8N8E3 955 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PNLDC1Q8NA58 520 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC2A12Q8TD20 617 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ELP5Q8TE02 316 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TSEN15Q8WW01 171 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 OVCA2Q8WZ82 227 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ANKRD7Q92527 254 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SEPT8Q92599 483 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 LPGAT1Q92604 370 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PIGKQ92643 395 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 BCL2L2Q92843 193 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 CIDECQ96AQ7 238 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ISG20Q96AZ6 181 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ELP4Q96EB1 424 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms