RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CRYL1Q9Y2S2 319 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 PCDHGA8Q9Y5G5 932 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 MRFAP1Q9Y605 127 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 CFAP20Q9Y6A4 193 aaKnown RBP7.09□□□□□ -1.27
GYPB-206ENST00000506516 COMMD10Q9Y6G5 202 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 LRP4O75096 1905 aa7.09□□□□□ -1.27
GYPB-206ENST00000506516 IGHV5-10-1A0A0J9YXX1 117 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SLC5A10A0PJK1 596 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CTAGE15A4D2H0 777 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 IQCF5A8MTL0 148 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 E5RI56 91 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 HGSO14964 777 aaPredicted RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 CASC3O15234 703 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 EIF3HO15372 352 aaKnown RBP eCLIP7.08□□□□□ -1.28
GYPB-206ENST00000506516 GPC4O75487 556 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 RPN2P04844 631 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 MPOP05164 745 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 JMJD7P0C870 316 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CTAGE8P0CG41 777 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ERVK-10P10266 1014 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PKMP14618 531 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 ARNTP27540 789 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 AOAHP28039 575 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PDHA2P29803 388 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CCR7P32248 378 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CSTF2P33240 577 aaKnown RBP eCLIP7.08□□□□□ -1.28
GYPB-206ENST00000506516 PREPP48147 710 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PLTPP55058 493 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CSE1LP55060 971 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 GABREP78334 506 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PDIA2Q13087 525 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 PRKAA1Q13131 559 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CTBP1Q13363 440 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CRYMQ14894 314 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ZNF658BQ4V348 819 aaPredicted RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 GLE1Q53GS7 698 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 C3orf38Q5JPI3 329 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 HP1BP3Q5SSJ5 553 aaPredicted RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 PLEKHS1Q5SXH7 462 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ARMC6Q6NXE6 501 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ZNF574Q6ZN55 896 aaPredicted RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 B3GNT8Q7Z7M8 397 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CTAGE6Q86UF2 777 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PDZD3Q86UT5 571 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 KCNMB4Q86W47 210 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 OOSP2Q86WS3 158 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SLITRK4Q8IW52 837 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CTAGE4Q8IX94 777 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ZBED8Q8IZ13 594 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 AGGF1Q8N302 714 aaeCLIP7.08□□□□□ -1.28
GYPB-206ENST00000506516 AGBL5Q8NDL9 886 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ACVR1CQ8NER5 493 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PYROXD1Q8WU10 500 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 LCN9Q8WX39 176 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 LPGAT1Q92604 370 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ART4Q93070 314 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CFAP36Q96G28 342 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PWWP2AQ96N64 755 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 FOPNLQ96NB1 174 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SLC46A1Q96NT5 459 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 TGM7Q96PF1 710 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 NUDT22Q9BRQ3 303 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 LRRC1Q9BTT6 524 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 RAB33BQ9H082 229 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 TRIT1Q9H3H1 467 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 KIR3DX1Q9H7L2 352 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 FBXO6Q9NRD1 293 aaPredicted RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 IARS2Q9NSE4 1012 aaKnown RBP7.08□□□□□ -1.28
GYPB-206ENST00000506516 HRASLS2Q9NWW9 162 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 IL1RAPL1Q9NZN1 696 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 PDP2Q9P2J9 529 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 DKK4Q9UBT3 224 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SLC24A2Q9UI40 661 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 FBXO5Q9UKT4 447 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SATB2Q9UPW6 733 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 CHMP2BQ9UQN3 213 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 ASF1AQ9Y294 204 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 TEX264Q9Y6I9 313 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 SCN8AQ9UQD0 1980 aa7.08□□□□□ -1.28
GYPB-206ENST00000506516 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 PRAMEF33A0A0G2JMD5 474 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 A8MU76 341 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 E7ESA3 106 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 MATN2O00339 956 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 PLD2O14939 933 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 TOX3O15405 576 aaPredicted RBP7.07□□□□□ -1.28
GYPB-206ENST00000506516 BRINP1O60477 761 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 BANF1O75531 89 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 RASSF9O75901 435 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 HAUS5O94927 633 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 SLCO2B1O94956 709 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 TNFSF15O95150 251 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 THRAP10827 490 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 MPSTP25325 297 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 ACADLP28330 430 aa7.07□□□□□ -1.28
GYPB-206ENST00000506516 SKIV2L2P42285 1042 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms