RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 XKR8Q9H6D3 395 aa23.94■■□□□ 1.42
HERC4-212ENST00000505760 PIH1D1Q9NWS0 290 aaKnown RBP23.94■■□□□ 1.42
HERC4-212ENST00000505760 PSMD3O43242 534 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 AP2A2O94973 939 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 RAB40ALP0C0E4 278 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 LMAN1P49257 510 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 CCL11P51671 97 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 SRSF1Q07955 248 aaKnown RBP eCLIP23.93■■□□□ 1.42
HERC4-212ENST00000505760 BOP1Q14137 746 aaKnown RBP23.93■■□□□ 1.42
HERC4-212ENST00000505760 DBN1Q16643 649 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 LCN10Q6JVE6 187 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 HOOK3Q86VS8 718 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 TAB3Q8N5C8 712 aaPredicted RBP23.93■■□□□ 1.42
HERC4-212ENST00000505760 TRAPPC9Q96Q05 1148 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 ACTR10Q9NZ32 417 aa23.93■■□□□ 1.42
HERC4-212ENST00000505760 PACSIN2Q9UNF0 486 aaPredicted RBP23.93■■□□□ 1.42
HERC4-212ENST00000505760 CCDC78A2IDD5 438 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 MIF4GDA9UHW6 222 aaKnown RBP23.92■■□□□ 1.42
HERC4-212ENST00000505760 AP2A1O95782 977 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 PVRP15151 417 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 RORAP35398 523 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 NSG1P42857 185 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 PTGIRP43119 386 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 SYTL1Q8IYJ3 562 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 ADGRF3Q8IZF5 1079 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 TMEM121Q9BTD3 319 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 PCMTD2Q9NV79 361 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 TCFL5Q9UL49 500 aa23.92■■□□□ 1.42
HERC4-212ENST00000505760 R3HDM2Q9Y2K5 976 aaKnown RBP23.92■■□□□ 1.42
HERC4-212ENST00000505760 PCDHGA9Q9Y5G4 932 aaKnown RBP23.92■■□□□ 1.42
HERC4-212ENST00000505760 TTLL8A6PVC2 850 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 E7EQ34 232 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 QSOX1O00391 747 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 LIN7AO14910 233 aaPredicted RBP23.91■■□□□ 1.42
HERC4-212ENST00000505760 MSNP26038 577 aaKnown RBP23.91■■□□□ 1.42
HERC4-212ENST00000505760 CD97P48960 835 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 GDF10P55107 478 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 ITGA1P56199 1179 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 KLF1Q13351 362 aaPredicted RBP23.91■■□□□ 1.42
HERC4-212ENST00000505760 ZNF789Q5FWF6 425 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 SPESP1Q6UW49 350 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 LINC00523Q86TU6 105 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 FAM26EQ8N5C1 309 aa23.91■■□□□ 1.42
HERC4-212ENST00000505760 N4BP2L2Q92802 583 aaPredicted RBP23.91■■□□□ 1.42
HERC4-212ENST00000505760 FTCDO95954 541 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 FTH1P02794 183 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 KIF5AQ12840 1032 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 BRD3Q15059 726 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 PTCHD3Q3KNS1 767 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 FAM69BQ5VUD6 431 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 CDHR3Q6ZTQ4 885 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 GPR135Q8IZ08 494 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 TXLNBQ8N3L3 684 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 EFCAB3Q8N7B9 438 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 OR5AR1Q8NGP9 310 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 SLC35B2Q8TB61 432 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 ADAMTS17Q8TE56 1095 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 ELMO1Q92556 727 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 BAG1Q99933 345 aaPredicted RBP23.9■■□□□ 1.42
HERC4-212ENST00000505760 DPH2Q9BQC3 489 aaPredicted RBP23.9■■□□□ 1.42
HERC4-212ENST00000505760 ICKQ9UPZ9 632 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 ASF1AQ9Y294 204 aa23.9■■□□□ 1.42
HERC4-212ENST00000505760 USP9XQ93008 2570 aaPredicted RBP23.89■■□□□ 1.42
HERC4-212ENST00000505760 CLEC18AA5D8T8 446 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 MROH6A6NGR9 719 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 C9J4A7 227 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 TMEM63AO94886 807 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 HBQ1P09105 142 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 AGXTP21549 392 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 SHMT2P34897 504 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 ITIH4Q14624 930 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 SYTL3Q4VX76 610 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 CCDC38Q502W7 563 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 FAM198BQ6UWH4 519 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 CLEC18BQ6UXF7 455 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 DNAAF3Q8N9W5 541 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 CLEC18CQ8NCF0 446 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.89■■□□□ 1.41
HERC4-212ENST00000505760 G3BP2Q9UN86 482 aaKnown RBP23.89■■□□□ 1.41
HERC4-212ENST00000505760 PRSS21Q9Y6M0 314 aa23.89■■□□□ 1.41
HERC4-212ENST00000505760 UTP20O75691 2785 aaKnown RBP23.89■■□□□ 1.41
HERC4-212ENST00000505760 USP9YO00507 2555 aaPredicted RBP23.88■■□□□ 1.41
HERC4-212ENST00000505760 TCRBV7S2A1N4TA0A589 114 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 OR51F1A6NGY5 319 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 ZNF749O43361 778 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 GAS8O95995 478 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 CAPN1P07384 714 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 PACS1Q6VY07 963 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 C19orf47Q8N9M1 422 aaKnown RBP23.88■■□□□ 1.41
HERC4-212ENST00000505760 MLXIPLQ9NP71 852 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 POLG2Q9UHN1 485 aa23.88■■□□□ 1.41
HERC4-212ENST00000505760 TDRKHQ9Y2W6 561 aaKnown RBP23.88■■□□□ 1.41
HERC4-212ENST00000505760 CCDC162PA2VCL2 907 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 VPS4BO75351 444 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 OR56A5P0C7T3 313 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 CDH17Q12864 832 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 NCF4Q15080 339 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 NADK2Q4G0N4 442 aa23.87■■□□□ 1.41
HERC4-212ENST00000505760 PAPD7Q5XG87 772 aaKnown RBP23.87■■□□□ 1.41
HERC4-212ENST00000505760 UNC5AQ6ZN44 842 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 228.2 ms