RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PPA1Q15181 289 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 ARHGAP11AQ6P4F7 1023 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 GAREM2Q75VX8 874 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 VN1R5Q7Z5H4 357 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 PHC2Q8IXK0 858 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 MCOLN2Q8IZK6 566 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 DSELQ8IZU8 1212 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 PARP8Q8N3A8 854 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 ZNF276Q8N554 614 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 DNAAF3Q8N9W5 541 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 KDM1BQ8NB78 822 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 IL17RDQ8NFM7 739 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 OR8K5Q8NH50 307 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 HTRA1Q92743 480 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 SLC22A18Q96BI1 424 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 ZHX1-C8orf76Q96EF9 292 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 TMEM120AQ9BXJ8 343 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 CD207Q9UJ71 328 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 COG5Q9UP83 839 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 NAALADL1Q9UQQ1 740 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 MN1Q10571 1320 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 DOCK6Q96HP0 2047 aa9.45□□□□□ -0.9
PDLIM5-207ENST00000503974 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 BTNL10A8MVZ5 291 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ENO1P06733 434 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 USP17L7P0C7H9 530 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 IFI30P13284 250 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 LCP1P13796 627 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 EDN3P14138 238 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TIMP2P16035 220 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 EEF1DP29692 281 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ITGA8P53708 1063 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 RPP30P78346 268 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TAF10Q12962 218 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NR1H3Q13133 447 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MAPKAPK3Q16644 382 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TYSND1Q2T9J0 566 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 LDLRAP1Q5SW96 308 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 FAM183BPQ6ZVS7 135 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SLC26A9Q7LBE3 791 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ARCQ7LC44 396 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 GRASPQ7Z6J2 395 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SCD5Q86SK9 330 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MON1AQ86VX9 555 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MIB1Q86YT6 1006 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ZCCHC7Q8N3Z6 543 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SNX31Q8N9S9 440 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ZNF527Q8NB42 609 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SLC37A3Q8NCC5 494 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SETD7Q8WTS6 366 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ATOH1Q92858 354 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 FBXO32Q969P5 355 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ATP6V1E2Q96A05 226 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 PIWIL1Q96J94 861 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 SLITRK1Q96PX8 696 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 C11orf70Q9BRQ4 267 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NUP210Q8TEM1 1887 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ZNF840PA6NDX5 716 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 EFCAB10A6NFE3 127 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 HACD1B0YJ81 288 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 HTR3BO95264 441 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CDK1P06493 297 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MBL2P11226 248 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 PFKLP17858 780 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CYP2A7P20853 494 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 GABRR2P28476 465 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 GPC1P35052 558 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 KCNJ10P78508 379 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CCDC85BQ15834 202 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 PDPK2PQ6A1A2 396 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 TYW3Q6IPR3 259 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 KRT80Q6KB66 452 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CES5AQ6NT32 575 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 LIPIQ6XZB0 460 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CENPUQ71F23 418 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NOXA1Q86UR1 476 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 HORMAD1Q86X24 394 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 KIF18BQ86Y91 864 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 JAMLQ86YT9 394 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CCDC185Q8N715 623 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 CLEC4CQ8WTT0 213 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ST8SIA4Q92187 359 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.91e-6■■■■□ 20.4
PDLIM5-207ENST00000503974 CD101Q93033 1021 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 HLA-CQ95604 372 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MSANTD3Q96H12 275 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NECTIN4Q96NY8 510 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 NMUR2Q9GZQ4 415 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 ARMCX1Q9P291 453 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 RIMS3Q9UJD0 308 aa9.44□□□□□ -0.9
PDLIM5-207ENST00000503974 MAGED2Q9UNF1 606 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms