RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DSG4Q86SJ6 1040 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 EXOC3L1Q86VI1 746 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 IQCHQ86VS3 1027 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 LONP2Q86WA8 852 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 PTOV1Q86YD1 416 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 HSCBQ8IWL3 235 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 LMNTD2Q8IXW0 634 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF595Q8IYB9 648 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 RFLNBQ8N5W9 214 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 POC1AQ8NBT0 407 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 EXD1Q8NHP7 514 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 SMPDL3BQ92485 455 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 DAZLQ92904 295 aaKnown RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 VPS33AQ96AX1 596 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF653Q96CK0 615 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 RMDN1Q96DB5 314 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 MTERF3Q96E29 417 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 LINC00615Q96LM1 132 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 INPP4AQ96PE3 977 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 MS4A10Q96PG2 267 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLX1AQ9BQ83 275 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 GPR88Q9GZN0 384 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANKRD2Q9GZV1 360 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 DPAGT1Q9H3H5 408 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 EVA1AQ9H8M9 152 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 ERVMER34-1Q9H9K5 563 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 FKRPQ9H9S5 495 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 TBC1D17Q9HA65 648 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 EQTNQ9NQ60 294 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 OSER1Q9NX31 292 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 C5AR2Q9P296 337 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 RASAL2Q9UJF2 1139 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 OSGIN1Q9UJX0 560 aa2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPIN1Q9Y657 262 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P35-201ENST00000503360 A0A0G2JNG1 304 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 A0A1W2PS18 150 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MED19A0JLT2 244 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CTAGE9A4FU28 777 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 DVL1O14640 695 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MEIS2O14770 477 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 HTATSF1O43719 755 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 SYNCRIPO60506 623 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PDE9AO76083 593 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 TOMM70O94826 608 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLCO2B1O94956 709 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 H1F0P07305 194 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 QDPRP09417 244 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 LINGO3P0C6S8 592 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM200BP0CF97 657 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CTAGE8P0CG41 777 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ACP2P11117 423 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CSF2RAP15509 400 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CKMT2P17540 419 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CBLP22681 906 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANOS1P23352 680 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 DGKAP23743 735 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ATP6V1E1P36543 226 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 NOVP48745 357 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 FMO5P49326 533 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MMP15P51511 669 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF75DP51815 510 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 RAD23AP54725 363 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 RPL24P83731 157 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 RALGDSQ12967 914 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 HSPB3Q12988 150 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CAMK2DQ13557 499 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 KIR2DS5Q14953 304 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 DUOXA1Q1HG43 343 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ASPRV1Q53RT3 343 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 SIRPB2Q5JXA9 342 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PDSS1Q5T2R2 415 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARMC4Q5T2S8 1044 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CST9LP1Q5W188 147 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PLBD1Q6P4A8 553 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PACS1Q6VY07 963 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF852Q6ZMS4 543 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM114A1Q8IWE2 563 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CTAGE4Q8IX94 777 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 THNSL1Q8IYQ7 743 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 NAGSQ8N159 534 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MAB21L3Q8N8X9 362 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 L3MBTL4Q8NA19 623 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 KBTBD3Q8NAB2 608 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 PAPD5Q8NDF8 572 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR5M8Q8NGP6 311 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR13A1Q8NGR1 328 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MOSPD2Q8NHP6 518 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 MRPS27Q92552 414 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CD101Q93033 1021 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC47Q96A33 483 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 SPDL1Q96EA4 605 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ABHD8Q96I13 439 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF583Q96ND8 569 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 TSPAN18Q96SJ8 248 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 LRRC1Q9BTT6 524 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ABHD6Q9BV23 337 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 NOL11Q9H8H0 719 aaKnown RBP2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANKZF1Q9H8Y5 726 aa2.3□□□□□ -2.04
HMGB1P35-201ENST00000503360 CNOT10Q9H9A5 744 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms