RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 USP16Q9Y5T5 823 aa5.51□□□□□ -1.53
NIPBL-203ENST00000503274 BRCA1P38398 1863 aaKnown RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ANKRD66B4E2M5 251 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 TMEM178BH3BS89 294 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 J3QR06 171 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ZBTB43O43298 467 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 LMX1BO60663 402 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ALOX12P18054 663 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ALDH1B1P30837 517 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 AHRP35869 848 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 CASP2P42575 452 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 MMP14P50281 582 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 MRPS5P82675 430 aaKnown RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 LMOD3Q0VAK6 560 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 MEA1Q16626 185 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 MEP1AQ16819 746 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 RAB6CQ53S08 254 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 PLEKHS1Q5SXH7 462 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF852Q6ZMS4 543 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 KIF6Q6ZMV9 814 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 NFE4Q86UQ8 179 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 MCEMP1Q8IX19 187 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 SAT2Q96F10 170 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF583Q96ND8 569 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 DACH2Q96NX9 599 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 NODALQ96S42 347 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 TRMT61BQ9BVS5 477 aaKnown RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 RAB6CQ9H0N0 254 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 TMX4Q9H1E5 349 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 ZFP57Q9NU63 452 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 RCC2Q9P258 522 aaKnown RBP5.5□□□□□ -1.53
NIPBL-203ENST00000503274 TSPYL4Q9UJ04 414 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 UBR2Q8IWV8 1755 aa5.5□□□□□ -1.53
NIPBL-203ENST00000503274 KIAA1551Q9HCM1 1747 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 AFDNP55196 1824 aaKnown RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 ERVV-1B6SEH8 477 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 TMEM189-UBE2V1I3L0A0 370 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 DVL1O14640 695 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 GH2P01242 217 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 NR2F2P24468 414 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 HOXA1P49639 335 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 DVL1P1P54792 670 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 MFAP4P55083 255 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 CD81P60033 236 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 GAGE5Q13069 117 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 GAGE6Q13070 117 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 UBE2V1Q13404 147 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 ACVR2BQ13705 512 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 KCNC3Q14003 757 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 RBBP5Q15291 538 aaKnown RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 SIRPB2Q5JXA9 342 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 STPG1Q5TH74 334 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 ZDHHC20Q5W0Z9 365 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 ZNF534Q76KX8 674 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 SZRD1Q7Z422 152 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 C1orf52Q8N6N3 182 aaKnown RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 MMP28Q9H239 520 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 HRH4Q9H3N8 390 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 DNAJC18Q9H819 358 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 SUCLA2Q9P2R7 463 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 TBC1D29Q9UFV1 150 aa5.49□□□□□ -1.53
NIPBL-203ENST00000503274 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.49□□□□□ -1.53
NIPBL-203ENST00000503274 NRXN2Q9P2S2 1712 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 SBF1O95248 1867 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 TAF1P21675 1872 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 A0A1W2PR77 199 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 FAM172BPA6NC97 362 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 B4DLN1 442 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 P2RY10O00398 339 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 SYNGR3O43761 229 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 FGF17O60258 216 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MITFO75030 526 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 TSPAN9O75954 239 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 WISP2O76076 250 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 SELLP14151 372 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MARK3P27448 753 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MRPL12P52815 198 aaKnown RBP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MLLT10P55197 1068 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 RIPK4P57078 832 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 PPP2R2BQ00005 443 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 WDR43Q15061 677 aaKnown RBP eCLIP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 FASTKD5Q7L8L6 764 aaKnown RBP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 PPP1R42Q7Z4L9 355 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 CIARTQ8N365 385 aaPredicted RBP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 GBGT1Q8N5D6 347 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 NSUN4Q96CB9 384 aaKnown RBP5.48□□□□□ -1.53
NIPBL-203ENST00000503274 DDOQ99489 341 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MIS18AQ9NYP9 233 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 TAAR2Q9P1P5 351 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 DNAJB4Q9UDY4 337 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 GPR34Q9UPC5 381 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 YIPF1Q9Y548 306 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 MAP3K15Q6ZN16 1313 aa5.48□□□□□ -1.53
NIPBL-203ENST00000503274 SIPA1L3O60292 1781 aaPredicted RBP5.47□□□□□ -1.53
NIPBL-203ENST00000503274 A0A1W2PQ09 198 aa5.47□□□□□ -1.53
NIPBL-203ENST00000503274 LRRC72A6NJI9 287 aa5.47□□□□□ -1.53
NIPBL-203ENST00000503274 C15orf62A8K5M9 175 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms