RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SFRP1Q8N474 314 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 TTC30BQ8N4P2 665 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 AOPEPQ8N6M6 819 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 EXD1Q8NHP7 514 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 THAP4Q8WY91 577 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 NRGNQ92686 78 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 UBE2FQ969M7 185 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 C14orf79Q96F83 325 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 ZNF599Q96NL3 588 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 TGM7Q96PF1 710 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 CSPG4P5Q96PW8 444 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 MGME1Q9BQP7 344 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 MCCC2Q9HCC0 563 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 PCDH18Q9HCL0 1135 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 KLC4Q9NSK0 619 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 B3GNT3Q9Y2A9 372 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 CACNA1CQ13936 2221 aa5.42□□□□□ -1.54
SPTA1-209ENST00000498708 C1orf232A0A0U1RR37 186 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 A0A1B0GUH1 482 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 PDZK1P1A8MUH7 402 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FADS2P1A8MWK0 482 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 EIF3CLB5ME19 914 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DDX3XO00571 662 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 KIF1CO43896 1103 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MFSD11O43934 449 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DNAJC6O75061 913 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MTX2O75431 263 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 RASSF9O75901 435 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 KIAA0754O94854 1291 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 PIRTP0C851 137 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 AMD1P17707 334 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 TEAD1P28347 426 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MAN1A1P33908 653 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 HSPA9P38646 679 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FASLGP48023 281 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 HCAR3P49019 387 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 IST1P53990 364 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CDH6P55285 790 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MYL5Q02045 173 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DPTQ07507 201 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DMTNQ08495 405 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 NIPAL4Q0D2K0 466 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 KLHL30Q0D2K2 578 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 LAMB3Q13751 1172 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 GALNT3Q14435 633 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CDSNQ15517 529 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DPYSL2Q16555 572 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 INSCQ1MX18 579 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 ATP13A4Q4VNC1 1196 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 TDRD12Q587J7 1177 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CT47A1Q5JQC4 288 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DCAF10Q5QP82 559 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 E4F1Q66K89 784 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FAM199XQ6PEV8 388 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 IYDQ6PHW0 289 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FAM92BQ6ZTR7 304 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 APTXQ7Z2E3 356 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CUZD1Q86UP6 607 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 HPS6Q86YV9 775 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 TRIM48Q8IWZ4 208 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MRPL41Q8IXM3 137 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FBXO15Q8NCQ5 510 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 RELTQ969Z4 430 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SH3KBP1Q96B97 665 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 STAMBPL1Q96FJ0 436 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 COX14Q96I36 57 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 PLEKHG4BQ96PX9 1271 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 OR6C1Q96RD1 312 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 ERGIC2Q96RQ1 377 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 MCCC1Q96RQ3 725 aaPredicted RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 WDR24Q96S15 920 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 EIF3CQ99613 913 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SMAD5Q99717 465 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DPYSL5Q9BPU6 564 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SYT11Q9BT88 431 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 TDRD1Q9BXT4 1180 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 POLR1EQ9GZS1 481 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 TSPYL1Q9H0U9 437 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 OR2AG1Q9H205 316 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 FAM83DQ9H4H8 585 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SARS2Q9NP81 518 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 LMBRD1Q9NUN5 540 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 C19orf73Q9NVV2 129 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 RBM22Q9NW64 420 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SIDT1Q9NXL6 827 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 KCTD5Q9NXV2 234 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 DTLQ9NZJ0 730 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 ATXN10Q9UBB4 475 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CPNE7Q9UBL6 633 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 LNPEPQ9UIQ6 1025 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
SPTA1-209ENST00000498708 SCINQ9Y6U3 715 aa5.41□□□□□ -1.54
SPTA1-209ENST00000498708 AKAP6Q13023 2319 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 NUAK1O60285 661 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 SPAG6O75602 509 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 NDUFA10O95299 355 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 PRLP01236 227 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 VIPP01282 170 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 JCHAINP01591 159 aa5.4□□□□□ -1.54
SPTA1-209ENST00000498708 HLA-DQB2P05538 268 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms