RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 IGKV6D-41A0A0C4DH26 115 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 FRMD3A2A2Y4 597 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 GTPBP10A4D1E9 387 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 CLGNO14967 610 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 CYTH3O43739 400 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 LINC00271P0C7V0 271 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 HSPA1AP0DMV8 641 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 HSPA1BP0DMV9 641 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 MUTP22033 750 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 USP8P40818 1118 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 GYG1P46976 350 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 FKBP3Q00688 224 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 TFAP4Q01664 338 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 GABPAQ06546 454 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 GRSF1Q12849 480 aaKnown RBP eCLIP4.72□□□□□ -1.65
SSR3-209ENST00000498205 GRAPQ13588 217 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 FGFBP1Q14512 234 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 MTF1Q14872 753 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 SPA17Q15506 151 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 SLC15A2Q16348 729 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 TMEM266Q2M3C6 531 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 SLC45A4Q5BKX6 768 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 CCDC122Q5T0U0 273 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 FRG2Q64ET8 278 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 KLHL10Q6JEL2 608 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 TRNP1Q6NT89 227 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 ANKRD54Q6NXT1 300 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 LEKR1Q6ZMV7 388 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.72□□□□□ -1.658e-7■□□□□ 9.3
SSR3-209ENST00000498205 TUBA1AQ71U36 451 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 R3HCC1LQ7Z5L2 792 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 SFR1Q86XK3 245 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 DZIP1Q86YF9 867 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 ZNF444Q8N0Y2 327 aaPredicted RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 GRAPLQ8TC17 118 aaPredicted RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 AENQ8WTP8 325 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 SECISBP2LQ93073 1101 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 C7orf26Q96N11 449 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 TUBA1CQ9BQE3 449 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 EIF2AK1Q9BQI3 630 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 DESI2Q9BSY9 194 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 RETREG1Q9H6L5 497 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 SH2D4AQ9H788 454 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 PPP1R3EQ9H7J1 279 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 UBTD1Q9HAC8 227 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 LZTFL1Q9NQ48 299 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 AIPL1Q9NZN9 384 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 ZNF69Q9UC07 566 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 MALT1Q9UDY8 824 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 KCNG2Q9UJ96 466 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 ZHX1Q9UKY1 873 aaPredicted RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 INTS6Q9UL03 887 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 ICAM5Q9UMF0 924 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 CEPT1Q9Y6K0 416 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 COL2A1P02458 1487 aaPredicted RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 TCF20Q9UGU0 1960 aaKnown RBP4.72□□□□□ -1.65
SSR3-209ENST00000498205 SBF2Q86WG5 1849 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 KIF13BQ9NQT8 1826 aa4.72□□□□□ -1.65
SSR3-209ENST00000498205 COL4A1P02462 1669 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 GOLGA8KD6RF30 607 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 BBOX1O75936 387 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 KDM4BO94953 1096 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 RTN3O95197 1032 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 TSPY3P0CV98 308 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 TSPY8P0CW00 308 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 MT3P25713 68 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 PRKCIP41743 596 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 HNRNPH2P55795 449 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 STX17P56962 302 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 VSNL1P62760 191 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 FKBP1AP62942 108 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 DYNLL1P63167 89 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 KARSQ15046 597 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 SYT16Q17RD7 645 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 C2orf68Q2NKX9 166 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 ZNF672Q499Z4 452 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 SETMARQ53H47 684 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 C9orf50Q5SZB4 431 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 SIGIRRQ6IA17 410 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 FBXO46Q6PJ61 603 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 SLC36A4Q6YBV0 504 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 PAF1Q8N7H5 531 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 PSPC1Q8WXF1 523 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 JAKMIP2Q96AA8 810 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 HES6Q96HZ4 224 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 FEM1CQ96JP0 617 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 CNOT6LQ96LI5 555 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 CCDC42Q96M95 316 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 TSG101Q99816 390 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 SLF1Q9BQI6 1058 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 FAM129AQ9BZQ8 928 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 VPS33BQ9H267 617 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 NHEJ1Q9H9Q4 299 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 BLOC1S4Q9NUP1 217 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 TAB2Q9NYJ8 693 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 UBA2Q9UBT2 640 aaPredicted RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 SEC63Q9UGP8 760 aaKnown RBP4.71□□□□□ -1.66
SSR3-209ENST00000498205 HPCAL4Q9UM19 191 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms