RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CDRT15Q96T59 188 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SLC30A3Q99726 388 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NPAS2Q99743 824 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 BOCQ9BWV1 1114 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 CD244Q9BZW8 370 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 LINC00597Q9H2U6 94 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SLC32A1Q9H598 525 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 NOL11Q9H8H0 719 aaKnown RBP6.79□□□□□ -1.32
USP39-219ENST00000496047 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PARVBQ9HBI1 364 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ZFP14Q9HCL3 533 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 S100A14Q9HCY8 104 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PCDH12Q9NPG4 1184 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 AIG1Q9NVV5 245 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ELOVL2Q9NXB9 296 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 SLCO3A1Q9UIG8 710 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 FBXO10Q9UK96 956 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 MAPRE3Q9UPY8 281 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 BTRCQ9Y297 605 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 AP3M1Q9Y2T2 418 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 PCDHGA11Q9Y5H2 935 aa6.79□□□□□ -1.32
USP39-219ENST00000496047 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 HTTP42858 3142 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ATP6AP2A0A1C7CYW4 349 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 KANSL1LA0AUZ9 987 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 HEPACAM2A8MVW5 462 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 GAPDHSO14556 408 aaPredicted RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 UBFD1O14562 309 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 CLGNO14967 610 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PER2O15055 1255 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NPC1O15118 1278 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NUAK1O60285 661 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 DNAJA2O60884 412 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 TULP3O75386 442 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 SLC22A3O75751 556 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ATP6AP2O75787 350 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 CLDN9O95484 217 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 APODP05090 189 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 LINC00032P0C843 101 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 LHCGRP22888 699 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 AOAHP28039 575 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 MMP12P39900 470 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 EIF2DP41214 584 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 KCNC1P48547 511 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 HSPA13P48723 471 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 CLNS1AP54105 237 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 HSPA14Q0VDF9 509 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PRKG2Q13237 762 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NFYCQ13952 458 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 INPP5AQ14642 412 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PPP1R3AQ16821 1122 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 XKR7Q5GH72 579 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PIGGQ5H8A4 983 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 HENMT1Q5T8I9 393 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 CES5AQ6NT32 575 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 SERPINA13PQ6UXR4 307 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 TMC5Q6UXY8 1006 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 SYVN1Q86TM6 617 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 SPATA24Q86W54 205 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 HPS6Q86YV9 775 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NPAS3Q8IXF0 933 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PNPLA1Q8N8W4 532 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 GLB1L3Q8NCI6 653 aaPredicted RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 TNIP2Q8NFZ5 429 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 DNAJB8Q8NHS0 232 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ITFG1Q8TB96 612 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PIP4K2CQ8TBX8 421 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 FRS2Q8WU20 508 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 STARD8Q92502 1023 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 POP5Q969H6 163 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 GLYATL1Q969I3 302 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 RHBDF1Q96CC6 855 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 AP2M1Q96CW1 435 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 EID2BQ96D98 161 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 SPDL1Q96EA4 605 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 MOCOSQ96EN8 888 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NAF1Q96HR8 494 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 GUCD1Q96NT3 240 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ACOX2Q99424 681 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ZNF184Q99676 751 aaPredicted RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 NTMT1Q9BV86 223 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 BRINP2Q9C0B6 783 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 KLHL4Q9C0H6 718 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 ACTR8Q9H981 624 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 CACNA2D2Q9NY47 1150 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 NKX1-2Q9UD57 310 aaPredicted RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 CD84Q9UIB8 345 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PTBP2Q9UKA9 531 aaKnown RBP6.78□□□□□ -1.32
USP39-219ENST00000496047 SARDHQ9UL12 918 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 PSMD13Q9UNM6 376 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 LRCH1Q9Y2L9 728 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
USP39-219ENST00000496047 DOCK9Q9BZ29 2069 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms