RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 SLAMF8Q9P0V8 285 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 DNMT3BQ9UBC3 853 aaKnown RBP9.66□□□□□ -0.86
SURF1-204ENST00000495952 MTRRQ9UBK8 725 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.66□□□□□ -0.86
SURF1-204ENST00000495952 ADGRE2Q9UHX3 823 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 ENPP5Q9UJA9 477 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
SURF1-204ENST00000495952 MAPRE3Q9UPY8 281 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 ZNF510Q9Y2H8 683 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 SH3GLB1Q9Y371 365 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 ANGPTL3Q9Y5C1 460 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 BACE2Q9Y5Z0 518 aa9.66□□□□□ -0.86
SURF1-204ENST00000495952 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
SURF1-204ENST00000495952 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 PIKFYVEQ9Y2I7 2098 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZNF840PA6NDX5 716 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 AGAP14A8MT82 685 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 SLC1A7O00341 560 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 MANBAO00462 879 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 SLC22A1O15245 554 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 TAPBPO15533 448 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 OR1I1O60431 355 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 DFNA5O60443 496 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 UGT2B11O75310 529 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 GABARAPO95166 117 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CLIC3O95833 236 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CD160O95971 181 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
SURF1-204ENST00000495952 SLC2A4P14672 509 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 JUNDP17535 347 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 EEF1B2P24534 225 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 ACRV1P26436 265 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 RPL10P27635 214 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 ELK4P28324 431 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 GGT5P36269 586 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 DCTP40126 519 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 GZMMP51124 257 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CLDN8P56748 225 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 C21orf58P58505 322 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 RPS14P62263 151 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 RPS24P62847 133 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 KCNAB2Q13303 367 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 SP140Q13342 867 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZNF846Q147U1 533 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ABRAXAS2Q15018 415 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 IMPG1Q17R60 797 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 EML3Q32P44 896 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 RFTN2Q52LD8 501 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 OTUD3Q5T2D3 398 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 RNF219Q5W0B1 726 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 NIPAL1Q6NVV3 410 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ERICH5Q6P6B1 374 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 SHQ1Q6PI26 577 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 SCIMPQ6UWF3 145 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 TAS2R42Q7RTR8 314 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 R3HCC1LQ7Z5L2 792 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 RNF180Q86T96 592 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ITIH5Q86UX2 942 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 MSRB3Q8IXL7 192 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 PARP8Q8N3A8 854 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CPA6Q8N4T0 437 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZBTB2Q8N680 514 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZNF513Q8N8E2 541 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 HJURPQ8NCD3 748 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 RHBDF1Q96CC6 855 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 METTL2AQ96IZ6 378 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 ITCHQ96J02 903 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 FCRL1Q96LA6 429 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 LYSMD1Q96S90 227 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZNF347Q96SE7 839 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 TSEN34Q9BSV6 310 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 KLF16Q9BXK1 252 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 GPR63Q9BZJ6 419 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 GPR62Q9BZJ7 368 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 TRIM8Q9BZR9 551 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 PAIP1Q9H074 479 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 CRISPLD1Q9H336 500 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 TRIT1Q9H3H1 467 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 KAT8Q9H7Z6 458 aaKnown RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 RHBDL2Q9NX52 303 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 KCTD5Q9NXV2 234 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 HECAQ9UBI9 543 aaPredicted RBP9.65□□□□□ -0.86
SURF1-204ENST00000495952 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 USP22Q9UPT9 525 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
SURF1-204ENST00000495952 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 CBX4O00257 560 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 GFRA2O00451 464 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 GAPDHSO14556 408 aaPredicted RBP9.64□□□□□ -0.87
SURF1-204ENST00000495952 PER2O15055 1255 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
SURF1-204ENST00000495952 COCHO43405 550 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 CA12O43570 354 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 ULK1O75385 1050 aa9.64□□□□□ -0.87
SURF1-204ENST00000495952 CREG1O75629 220 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms